| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is bglP [H]
Identifier: 116493531
GI number: 116493531
Start: 1782238
End: 1784211
Strand: Reverse
Name: bglP [H]
Synonym: PEPE_1804
Alternate gene names: 116493531
Gene position: 1784211-1782238 (Counterclockwise)
Preceding gene: 116493534
Following gene: 116493530
Centisome position: 97.37
GC content: 38.65
Gene sequence:
>1974_bases ATGAAAAAAACAAATGATAATCTCATAGTTGTAGCACCAGCAAGTGGTAAGGTGATTCCACTTGAACAAGTAGAAGACCA AGTTTTTGCCCAAAAAATGATGGGGGAAGGTTTTGGGTTAGAACCTACTAACGGTAATCTAGTTGCTCCTGTGGCTGGGA CAGTAATGATGGTAGCTGATAGTAAGCACGCAATTGGTATTAAAACTGATAGTGGTGTCGAAATATTGCTACATCTCGGA ATTGATACCGTAGAACTAAAGGGCACCCCATATGATCTTAAAGTTCAAGTTGGCGATCATGTAGAAGCAGGAAGTAGCCT AGGAACTTGGGACTTAGATTTAGTGCGTAATAATGGCAAGCAAACTACTATAATCTTTGCAATCACTAATAGCAGTGAAG TGTTAGAGCAGTTGGAAATTGAAGCTGATACAGTTGAAGTAGGAAAAAATGTTGCAAATCTAAAATTAAAAACGGTTTCA GAAAAAGTGGAGCGTTCTAAAAGTAATGAAGGTAATCGCTTTGAAAAAACAGCTCAAAAAGTAATTGATGCAGTGGGCGG ACCCGACAATATCAATAGTGTGATTCACTGTATTTCTCGTTTACGCTTTTATTTGAAGGATATTAATAAACCCGATGATG ATATTATTCGAAATGACGACCATGTTATTGATATTATGCGTGCTCAAGGTCAATACCAAGTAGTGATTGGTCCAGATGTA GTCGATGTTTATGACGCAGTTATTGACCAATTAGGGACAGAATTTGGGGATGAAGAAGGAACCGAACAAGCCGTTAAAGC TACGCAACCACAAGGCCCTGATAACCGGAATTTCCTAGAAAAAACAAAAGATGGATTTAATAATTTTATTGGTGTAATTA CTGGTTCGATGAGCCCAGTGATTTGGTCATTGGCGGCAGCTGGTATTCTCAAGGGATTATTATCAGTCTTAACGATGCCA CAGATTGGGGAACTACTAAGTCCTAAAAGTAATTTATACATCATATTAAATGCCATTGGCGATTCAGTTTTCTTCTTCCT CCCAATTTTAGTAGGATTTTCTGCGGCAAAACGCATTGGTGGAGATCCAATCATCGCAGCCGTAATTGGTGGGGTATTGG TACATCCTACGCTAACTCCGTTGGCTGGAAAATCGTTAGGGATGTTGGGTGGATTTAACTTCCCAATGGTCCAATATTCA TACTCGATTTTCCCGATGATTTTAGCTGCTTGGTTGGCATTTAAAATTGAAAATTATTTGAAGAAACATTTACCAAGTTA TCTAACCATGATTTTTGTTCCATTTATTACAATTCTGATTGTTAGTGGAATTACGATTTATATTACTGGCCCAGTCATTG TCGGCATTTCTAAATGGATTGCGGTAATGATTTCATGGGTACTGGTTCATAGTGGATGGGCATCAGGAATTCTAGTAGGT GGTTTCCATCAAGTATTGGTAATCTTTGGTTTGCATTGGGGAATTACTCCATTGGTAGTTAATGACATAGCTACCACGGG ACACAGTTACTTAAATGCTTTGATTTGCCAAACCATGATTTCACAAGGTGCAGCTGTTTTAGCCGTGGCGATTAAGACTA AGAAAACTAACTTAAAGAGTTTATCATTTGCGGCTGCCATTTCAGCCTTTTGTGGAGTTACTGAACCCGCTATTTACGGG GTTAACCTCCGCTATAGAAGGGTCTTCATTTCTGGATTGATTGGTTCAGCATTTGGTGGATTTATAACCGGGTTGTTCCA TGGTAATATGTACGGATTTGCCGGTTCATGGATTGGTTTTGCATCCTTCTTTAATCCAAGCAATCCGTCTGATTTAAGCA GCTTCTGGATTTTCTTGATTTCCTCAGTTGTATCTACCATTATTGCCTTTATTGCAGCATACGTTTGGGGCTACAATGAC AAAATGGAAGTTGGTAAAAAGGTTGAAAAACCAATTAACCCTAGTAAAAAATAA
Upstream 100 bases:
>100_bases GTTGACATCTTGTATATACAAGTTTATGATAAAAGCATGTTAAATAGCAAGCGCTTACAAATATATTGAAATTATATTAG AGCATGTGAGGAATAATCTT
Downstream 100 bases:
>100_bases TTTGTAAAAAGCTAATATGTAGGAGGCCACCATGGGTATTCAATTAATTGCAAGTGATATCGACGGAACTTTTCTAAATG ATCAACAGGATTTTGACCAT
Product: Beta-glucoside-specific PTS system IIABC component
Products: NA
Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MKKTNDNLIVVAPASGKVIPLEQVEDQVFAQKMMGEGFGLEPTNGNLVAPVAGTVMMVADSKHAIGIKTDSGVEILLHLG IDTVELKGTPYDLKVQVGDHVEAGSSLGTWDLDLVRNNGKQTTIIFAITNSSEVLEQLEIEADTVEVGKNVANLKLKTVS EKVERSKSNEGNRFEKTAQKVIDAVGGPDNINSVIHCISRLRFYLKDINKPDDDIIRNDDHVIDIMRAQGQYQVVIGPDV VDVYDAVIDQLGTEFGDEEGTEQAVKATQPQGPDNRNFLEKTKDGFNNFIGVITGSMSPVIWSLAAAGILKGLLSVLTMP QIGELLSPKSNLYIILNAIGDSVFFFLPILVGFSAAKRIGGDPIIAAVIGGVLVHPTLTPLAGKSLGMLGGFNFPMVQYS YSIFPMILAAWLAFKIENYLKKHLPSYLTMIFVPFITILIVSGITIYITGPVIVGISKWIAVMISWVLVHSGWASGILVG GFHQVLVIFGLHWGITPLVVNDIATTGHSYLNALICQTMISQGAAVLAVAIKTKKTNLKSLSFAAAISAFCGVTEPAIYG VNLRYRRVFISGLIGSAFGGFITGLFHGNMYGFAGSWIGFASFFNPSNPSDLSSFWIFLISSVVSTIIAFIAAYVWGYND KMEVGKKVEKPINPSKK
Sequences:
>Translated_657_residues MKKTNDNLIVVAPASGKVIPLEQVEDQVFAQKMMGEGFGLEPTNGNLVAPVAGTVMMVADSKHAIGIKTDSGVEILLHLG IDTVELKGTPYDLKVQVGDHVEAGSSLGTWDLDLVRNNGKQTTIIFAITNSSEVLEQLEIEADTVEVGKNVANLKLKTVS EKVERSKSNEGNRFEKTAQKVIDAVGGPDNINSVIHCISRLRFYLKDINKPDDDIIRNDDHVIDIMRAQGQYQVVIGPDV VDVYDAVIDQLGTEFGDEEGTEQAVKATQPQGPDNRNFLEKTKDGFNNFIGVITGSMSPVIWSLAAAGILKGLLSVLTMP QIGELLSPKSNLYIILNAIGDSVFFFLPILVGFSAAKRIGGDPIIAAVIGGVLVHPTLTPLAGKSLGMLGGFNFPMVQYS YSIFPMILAAWLAFKIENYLKKHLPSYLTMIFVPFITILIVSGITIYITGPVIVGISKWIAVMISWVLVHSGWASGILVG GFHQVLVIFGLHWGITPLVVNDIATTGHSYLNALICQTMISQGAAVLAVAIKTKKTNLKSLSFAAAISAFCGVTEPAIYG VNLRYRRVFISGLIGSAFGGFITGLFHGNMYGFAGSWIGFASFFNPSNPSDLSSFWIFLISSVVSTIIAFIAAYVWGYND KMEVGKKVEKPINPSKK >Mature_657_residues MKKTNDNLIVVAPASGKVIPLEQVEDQVFAQKMMGEGFGLEPTNGNLVAPVAGTVMMVADSKHAIGIKTDSGVEILLHLG IDTVELKGTPYDLKVQVGDHVEAGSSLGTWDLDLVRNNGKQTTIIFAITNSSEVLEQLEIEADTVEVGKNVANLKLKTVS EKVERSKSNEGNRFEKTAQKVIDAVGGPDNINSVIHCISRLRFYLKDINKPDDDIIRNDDHVIDIMRAQGQYQVVIGPDV VDVYDAVIDQLGTEFGDEEGTEQAVKATQPQGPDNRNFLEKTKDGFNNFIGVITGSMSPVIWSLAAAGILKGLLSVLTMP QIGELLSPKSNLYIILNAIGDSVFFFLPILVGFSAAKRIGGDPIIAAVIGGVLVHPTLTPLAGKSLGMLGGFNFPMVQYS YSIFPMILAAWLAFKIENYLKKHLPSYLTMIFVPFITILIVSGITIYITGPVIVGISKWIAVMISWVLVHSGWASGILVG GFHQVLVIFGLHWGITPLVVNDIATTGHSYLNALICQTMISQGAAVLAVAIKTKKTNLKSLSFAAAISAFCGVTEPAIYG VNLRYRRVFISGLIGSAFGGFITGLFHGNMYGFAGSWIGFASFFNPSNPSDLSSFWIFLISSVVSTIIAFIAAYVWGYND KMEVGKKVEKPINPSKK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=468, Percent_Identity=35.2564102564103, Blast_Score=261, Evalue=9e-71, Organism=Escherichia coli, GI48994906, Length=485, Percent_Identity=30.9278350515464, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI2367362, Length=418, Percent_Identity=31.8181818181818, Blast_Score=178, Evalue=8e-46, Organism=Escherichia coli, GI1788769, Length=439, Percent_Identity=26.879271070615, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1788757, Length=149, Percent_Identity=37.5838926174497, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786894, Length=112, Percent_Identity=38.3928571428571, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011297 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 70936; Mature: 70936
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTNDNLIVVAPASGKVIPLEQVEDQVFAQKMMGEGFGLEPTNGNLVAPVAGTVMMVAD CCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEC SKHAIGIKTDSGVEILLHLGIDTVELKGTPYDLKVQVGDHVEAGSSLGTWDLDLVRNNGK CCCEEEEECCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC QTTIIFAITNSSEVLEQLEIEADTVEVGKNVANLKLKTVSEKVERSKSNEGNRFEKTAQK EEEEEEEECCCHHHHHHHHCCCHHHHHCCCHHHEEHHHHHHHHHHHCCCCCHHHHHHHHH VIDAVGGPDNINSVIHCISRLRFYLKDINKPDDDIIRNDDHVIDIMRAQGQYQVVIGPDV HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEHEECCCCEEEEECCCH VDVYDAVIDQLGTEFGDEEGTEQAVKATQPQGPDNRNFLEKTKDGFNNFIGVITGSMSPV HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IWSLAAAGILKGLLSVLTMPQIGELLSPKSNLYIILNAIGDSVFFFLPILVGFSAAKRIG HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCC GDPIIAAVIGGVLVHPTLTPLAGKSLGMLGGFNFPMVQYSYSIFPMILAAWLAFKIENYL CCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KKHLPSYLTMIFVPFITILIVSGITIYITGPVIVGISKWIAVMISWVLVHSGWASGILVG HHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH GFHQVLVIFGLHWGITPLVVNDIATTGHSYLNALICQTMISQGAAVLAVAIKTKKTNLKS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHH LSFAAAISAFCGVTEPAIYGVNLRYRRVFISGLIGSAFGGFITGLFHGNMYGFAGSWIGF HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ASFFNPSNPSDLSSFWIFLISSVVSTIIAFIAAYVWGYNDKMEVGKKVEKPINPSKK HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKTNDNLIVVAPASGKVIPLEQVEDQVFAQKMMGEGFGLEPTNGNLVAPVAGTVMMVAD CCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEC SKHAIGIKTDSGVEILLHLGIDTVELKGTPYDLKVQVGDHVEAGSSLGTWDLDLVRNNGK CCCEEEEECCCCCEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC QTTIIFAITNSSEVLEQLEIEADTVEVGKNVANLKLKTVSEKVERSKSNEGNRFEKTAQK EEEEEEEECCCHHHHHHHHCCCHHHHHCCCHHHEEHHHHHHHHHHHCCCCCHHHHHHHHH VIDAVGGPDNINSVIHCISRLRFYLKDINKPDDDIIRNDDHVIDIMRAQGQYQVVIGPDV HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEHEECCCCEEEEECCCH VDVYDAVIDQLGTEFGDEEGTEQAVKATQPQGPDNRNFLEKTKDGFNNFIGVITGSMSPV HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IWSLAAAGILKGLLSVLTMPQIGELLSPKSNLYIILNAIGDSVFFFLPILVGFSAAKRIG HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCC GDPIIAAVIGGVLVHPTLTPLAGKSLGMLGGFNFPMVQYSYSIFPMILAAWLAFKIENYL CCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KKHLPSYLTMIFVPFITILIVSGITIYITGPVIVGISKWIAVMISWVLVHSGWASGILVG HHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH GFHQVLVIFGLHWGITPLVVNDIATTGHSYLNALICQTMISQGAAVLAVAIKTKKTNLKS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHH LSFAAAISAFCGVTEPAIYGVNLRYRRVFISGLIGSAFGGFITGLFHGNMYGFAGSWIGF HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ASFFNPSNPSDLSSFWIFLISSVVSTIIAFIAAYVWGYNDKMEVGKKVEKPINPSKK HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]