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The map label for this gene is 116493528

Identifier: 116493528

GI number: 116493528

Start: 1779220

End: 1779816

Strand: Reverse

Name: 116493528

Synonym: PEPE_1801

Alternate gene names: NA

Gene position: 1779816-1779220 (Counterclockwise)

Preceding gene: 116493529

Following gene: 116493527

Centisome position: 97.13

GC content: 39.03

Gene sequence:

>597_bases
ATGAACGTATTAATTATTGGCGCAACAGGAACGATTGGAAATGCAGTAAGACAAACTTTATTAAGTGAAACAGATGCAAA
TTTAACCCTTTTTGCTCGAAGTGCCAACCGATTAAAACCCGGTAGTCGTGAAAAAGTGGTGGCTGGTGATGTAAACCAAG
CCCATGATTTAGACCAGGCGATGAAAAAGCAAGACGTCGTATTTGTAGCACTTAGTGGTAATTTAGGAACATATGCTGAA
AATATTGTATCAGCAATGAAACGTAATCAAATTGACCGCTTGCTATTTATTACCTCGATGGGAATCTATAATGAGATTCC
GGCAACAATTGGAAGCAATGGGAATTTAGAATATAATTCGGTCCTAAGTTCATATCGACAAGCAGCTGATGTTGTTGAAG
CTTCAGATTTGAATTACACCGTAATTCGTCCAGGTTGGTTTACTAGTGGTCCAGTAGATTACGAAGTTACATTAAAAGGA
GAACCGTTCGGAGGACATGATGTTTCGGTTAGTTCAATTGCTGATCTTGTAAAACGACTCACTTTTGATGCTACCTTGTA
TTCACGGGATAGTGTCGGAATTAACACCCCTCAATGA

Upstream 100 bases:

>100_bases
ACGCTATCATCATTATGGCCGTATTTATGTTGATTTCAGTCGGAGCTACTTTAAATATCGGTCTTAAAAAATAAGTGATT
TTATAAAGAGAGGGATTATC

Downstream 100 bases:

>100_bases
TTATATTTAAGGAAGAGTTGAAATTTATTTCAGCTCTTTTTGTTTTATAATGAGGTAAATCCATGAAGTGAGGTAAACTA
ATGTTTCAACAAATGCAGTA

Product: saccharopine dehydrogenase related protein

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Saccharopine Dehydrogenase Related Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA Family Protein; Saccharopine Dehydrogenase Or Related Protein; Saccharopine Dehydrogenase; NADH-Flavin Reductase

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNVLIIGATGTIGNAVRQTLLSETDANLTLFARSANRLKPGSREKVVAGDVNQAHDLDQAMKKQDVVFVALSGNLGTYAE
NIVSAMKRNQIDRLLFITSMGIYNEIPATIGSNGNLEYNSVLSSYRQAADVVEASDLNYTVIRPGWFTSGPVDYEVTLKG
EPFGGHDVSVSSIADLVKRLTFDATLYSRDSVGINTPQ

Sequences:

>Translated_198_residues
MNVLIIGATGTIGNAVRQTLLSETDANLTLFARSANRLKPGSREKVVAGDVNQAHDLDQAMKKQDVVFVALSGNLGTYAE
NIVSAMKRNQIDRLLFITSMGIYNEIPATIGSNGNLEYNSVLSSYRQAADVVEASDLNYTVIRPGWFTSGPVDYEVTLKG
EPFGGHDVSVSSIADLVKRLTFDATLYSRDSVGINTPQ
>Mature_198_residues
MNVLIIGATGTIGNAVRQTLLSETDANLTLFARSANRLKPGSREKVVAGDVNQAHDLDQAMKKQDVVFVALSGNLGTYAE
NIVSAMKRNQIDRLLFITSMGIYNEIPATIGSNGNLEYNSVLSSYRQAADVVEASDLNYTVIRPGWFTSGPVDYEVTLKG
EPFGGHDVSVSSIADLVKRLTFDATLYSRDSVGINTPQ

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21389; Mature: 21389

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIIGATGTIGNAVRQTLLSETDANLTLFARSANRLKPGSREKVVAGDVNQAHDLDQA
CCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHH
MKKQDVVFVALSGNLGTYAENIVSAMKRNQIDRLLFITSMGIYNEIPATIGSNGNLEYNS
HHHCCEEEEEEECCCCHHHHHHHHHHHHCCHHHEEEEECCCCHHCCCHHCCCCCCEEHHH
VLSSYRQAADVVEASDLNYTVIRPGWFTSGPVDYEVTLKGEPFGGHDVSVSSIADLVKRL
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TFDATLYSRDSVGINTPQ
HHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MNVLIIGATGTIGNAVRQTLLSETDANLTLFARSANRLKPGSREKVVAGDVNQAHDLDQA
CCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHH
MKKQDVVFVALSGNLGTYAENIVSAMKRNQIDRLLFITSMGIYNEIPATIGSNGNLEYNS
HHHCCEEEEEEECCCCHHHHHHHHHHHHCCHHHEEEEECCCCHHCCCHHCCCCCCEEHHH
VLSSYRQAADVVEASDLNYTVIRPGWFTSGPVDYEVTLKGEPFGGHDVSVSSIADLVKRL
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TFDATLYSRDSVGINTPQ
HHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA