| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493509
Identifier: 116493509
GI number: 116493509
Start: 1758772
End: 1759092
Strand: Reverse
Name: 116493509
Synonym: PEPE_1781
Alternate gene names: NA
Gene position: 1759092-1758772 (Counterclockwise)
Preceding gene: 116493510
Following gene: 116493508
Centisome position: 96.0
GC content: 43.3
Gene sequence:
>321_bases ATGGTCAAAAACAATGCTGCTCTTGCTGCGTTCAAGAAGAACATCCCACTGTTGGATGCCCTTTCTGACGAACGCCGTCA ACAAATTATGATTACACTTGGCGAAAGTGATGCGGGGCTGACGGTGAGTGAACTAACTAAGCTAATTGGTCTTTCACAAC CAGCCGTATCACACCATATCAAGCAGTTAAAAGACCTCAATTTGGTTTCCGTCCGCAAGGTTGGGACAAGTAATATTTAC CAATTGACGATCAAAGACGCATTGGCTCAGGTCCAAGAACTGATTGACATCTTGAGAAAAGATAAGAAGTTATTGCGATA G
Upstream 100 bases:
>100_bases GAAAAATAATTAAAGTTAATCTTAAGGTTGAATTGAATTAAATTTAGCGTTAAGATTTAATTTGTATTTAAATATTCGAA TATTCGAATGGAGGAGAAAG
Downstream 100 bases:
>100_bases ATCTTTTAGAAGTACATCATGATTCATATATCCGGATATATAAATTAAAGGTTAAAGGGGACTAGTTGGATGATTCGCAA AGAATGGAAGTTTATAGGGA
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator ArsR Family
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MVKNNAALAAFKKNIPLLDALSDERRQQIMITLGESDAGLTVSELTKLIGLSQPAVSHHIKQLKDLNLVSVRKVGTSNIY QLTIKDALAQVQELIDILRKDKKLLR
Sequences:
>Translated_106_residues MVKNNAALAAFKKNIPLLDALSDERRQQIMITLGESDAGLTVSELTKLIGLSQPAVSHHIKQLKDLNLVSVRKVGTSNIY QLTIKDALAQVQELIDILRKDKKLLR >Mature_106_residues MVKNNAALAAFKKNIPLLDALSDERRQQIMITLGESDAGLTVSELTKLIGLSQPAVSHHIKQLKDLNLVSVRKVGTSNIY QLTIKDALAQVQELIDILRKDKKLLR
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11772; Mature: 11772
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKNNAALAAFKKNIPLLDALSDERRQQIMITLGESDAGLTVSELTKLIGLSQPAVSHHI CCCCCHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHH KQLKDLNLVSVRKVGTSNIYQLTIKDALAQVQELIDILRKDKKLLR HHHHCCCHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVKNNAALAAFKKNIPLLDALSDERRQQIMITLGESDAGLTVSELTKLIGLSQPAVSHHI CCCCCHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHH KQLKDLNLVSVRKVGTSNIYQLTIKDALAQVQELIDILRKDKKLLR HHHHCCCHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA