Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is manX [H]
Identifier: 116493487
GI number: 116493487
Start: 1733804
End: 1734298
Strand: Reverse
Name: manX [H]
Synonym: PEPE_1759
Alternate gene names: 116493487
Gene position: 1734298-1733804 (Counterclockwise)
Preceding gene: 116493488
Following gene: 116493486
Centisome position: 94.65
GC content: 38.18
Gene sequence:
>495_bases ATGACAATTTCAGCGGTACGAATTGATGGACGGCTAATCCATGGACAAGTAGCCAATTTGTGGACAACGAAGCTCGGTGT AACAAGAATTATGGTGATTGATGACAAAGTGGCTGCAAGCGATATTGAAAAATCGGGTTTGAAATTAGCTCGACCAGCTG GTATTGATTTGAGTGTGCTCTCTGAAAAGGTAGCTGCTGATCATATTAAGCGTGGCGGCTATGATTCGCAAAAAGTATTT ATTGTGGTTAAACGACCACAAGTATTATTGGACTTGGTTAACGACGGAGTGAAGTTAGAAACGATTAATGTCGGAAATAT GTCACAGACGGATGAGACGACTCAAATCACTAATTCTATTAATGTAGTGCAAGACGATGTAGATGCATTTAAGGCACTAC ATGAAAAAGGAATTAAAATCACTCAGCAAATGGTTCCTGGTGATCAAGCCAATGACTTTATGGCAATTTTGAAAAAATTT GATACTAAAAAATAA
Upstream 100 bases:
>100_bases ATGGATTGAGCATGATGTATTAACCATCCCATATCAACTAAAAGGCTTAGAAACAGTAATTTTATTAGCATAGTTTTGAG AAAACAAAGGAGTGAGTAGT
Downstream 100 bases:
>100_bases GAAGGAGGCGTTCTTATGGGTTCAGGTATTGCAATATGGCAAGTAATTATTTTAACAATTTATTCAATGTACCAGATTAT GGATGAGTTAACGCTCCAAA
Product: phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTISAVRIDGRLIHGQVANLWTTKLGVTRIMVIDDKVAASDIEKSGLKLARPAGIDLSVLSEKVAADHIKRGGYDSQKVF IVVKRPQVLLDLVNDGVKLETINVGNMSQTDETTQITNSINVVQDDVDAFKALHEKGIKITQQMVPGDQANDFMAILKKF DTKK
Sequences:
>Translated_164_residues MTISAVRIDGRLIHGQVANLWTTKLGVTRIMVIDDKVAASDIEKSGLKLARPAGIDLSVLSEKVAADHIKRGGYDSQKVF IVVKRPQVLLDLVNDGVKLETINVGNMSQTDETTQITNSINVVQDDVDAFKALHEKGIKITQQMVPGDQANDFMAILKKF DTKK >Mature_163_residues TISAVRIDGRLIHGQVANLWTTKLGVTRIMVIDDKVAASDIEKSGLKLARPAGIDLSVLSEKVAADHIKRGGYDSQKVFI VVKRPQVLLDLVNDGVKLETINVGNMSQTDETTQITNSINVVQDDVDAFKALHEKGIKITQQMVPGDQANDFMAILKKFD TKK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=161, Percent_Identity=34.7826086956522, Blast_Score=99, Evalue=1e-22, Organism=Escherichia coli, GI87082217, Length=151, Percent_Identity=34.4370860927152, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789527, Length=148, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17984; Mature: 17853
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISAVRIDGRLIHGQVANLWTTKLGVTRIMVIDDKVAASDIEKSGLKLARPAGIDLSVL CCEEEEEECCEEEECHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCEEECCCCCCHHHH SEKVAADHIKRGGYDSQKVFIVVKRPQVLLDLVNDGVKLETINVGNMSQTDETTQITNSI HHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH NVVQDDVDAFKALHEKGIKITQQMVPGDQANDFMAILKKFDTKK HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TISAVRIDGRLIHGQVANLWTTKLGVTRIMVIDDKVAASDIEKSGLKLARPAGIDLSVL CEEEEEECCEEEECHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCEEECCCCCCHHHH SEKVAADHIKRGGYDSQKVFIVVKRPQVLLDLVNDGVKLETINVGNMSQTDETTQITNSI HHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH NVVQDDVDAFKALHEKGIKITQQMVPGDQANDFMAILKKFDTKK HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]