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The map label for this gene is ydaS [H]

Identifier: 116493400

GI number: 116493400

Start: 1654083

End: 1654337

Strand: Reverse

Name: ydaS [H]

Synonym: PEPE_1672

Alternate gene names: 116493400

Gene position: 1654337-1654083 (Counterclockwise)

Preceding gene: 116493401

Following gene: 116493399

Centisome position: 90.28

GC content: 45.1

Gene sequence:

>255_bases
ATGTTTGGATGGTTATGGTCATTAATTATAGGTGGTATTATCGGTGCCATCGCAGGAGCACTAACTAGTCGTGATTTACC
GGCTGGCTGGATTGGCAATATTGTTGCTGGACTTGTCGGTGCTTGGTTAGGACAAAGCCTATTGGGAACATGGGGACCTT
CCTTAGCAGGTATGGCGCTCGTTCCGTCAATTATCGGAGCAGTTATCTTAGTTGTAATTGTATCTGTTATCTTCGGAATG
CGTAAGAAGGGATAG

Upstream 100 bases:

>100_bases
ATTCTTTGATATGCAATCTGACAACATGATATCTTAATGGTGAACCAGTAAGCAATAGCGTTTATTGGTTATCAGCATAA
ACTGAAAGGAGTTGTTTTAT

Downstream 100 bases:

>100_bases
AGGTGATTACATGAGTCGAACCAGTAAGATTTTATTGAGTTTGATGGCAGTAATTACCCTGATTCAAACGGTTTGGTTCG
TTTCAAGTGAAATGTTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MFGWLWSLIIGGIIGAIAGALTSRDLPAGWIGNIVAGLVGAWLGQSLLGTWGPSLAGMALVPSIIGAVILVVIVSVIFGM
RKKG

Sequences:

>Translated_84_residues
MFGWLWSLIIGGIIGAIAGALTSRDLPAGWIGNIVAGLVGAWLGQSLLGTWGPSLAGMALVPSIIGAVILVVIVSVIFGM
RKKG
>Mature_84_residues
MFGWLWSLIIGGIIGAIAGALTSRDLPAGWIGNIVAGLVGAWLGQSLLGTWGPSLAGMALVPSIIGAVILVVIVSVIFGM
RKKG

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8528; Mature: 8528

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGWLWSLIIGGIIGAIAGALTSRDLPAGWIGNIVAGLVGAWLGQSLLGTWGPSLAGMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VPSIIGAVILVVIVSVIFGMRKKG
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGWLWSLIIGGIIGAIAGALTSRDLPAGWIGNIVAGLVGAWLGQSLLGTWGPSLAGMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VPSIIGAVILVVIVSVIFGMRKKG
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]