| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is dhaM [H]
Identifier: 116493388
GI number: 116493388
Start: 1648272
End: 1648640
Strand: Reverse
Name: dhaM [H]
Synonym: PEPE_1660
Alternate gene names: 116493388
Gene position: 1648640-1648272 (Counterclockwise)
Preceding gene: 116493389
Following gene: 116493387
Centisome position: 89.97
GC content: 38.75
Gene sequence:
>369_bases ATGGAATACGGTGTGGTAATTGTTTCGCATGTTAGTGAAATTGCTCAAGGCGTTAAACGTTTAATCGAACAAGTCGCTAA AGATGTTCCAGTTACGATTGCTGGTGGGTTAGAAAATGGTGATGTGGGAACCGATATGCAACGGATTATACAAGCATTTG AAGATAATTCTGCGACTAAGCTATTAGCCTTTTATGACTTAGGAAGCGCCAAAATGAATTTAGAAATGGCGATAGAAATG ACGGATAAAGAAGTTAAGTTGTATGACACCGCCCTGGTTGAAAGTGCCTATACGGCAGCGGCATTGTTACAAGTTGAGAC TAAAATTGAAGATGTCGAAGCGCAATTAAAAGATTTAAAAGTTAAGTGA
Upstream 100 bases:
>100_bases GCGCTTCTTATGTAGGGGAACGTTCAGTAGGGCATATTGATCCAGGTGCCATGTCTTCAGGTTACCTCTTGAAGGCCTTA CTAGAAGTGGAGGAATAGTT
Downstream 100 bases:
>100_bases CTGGAAATGAATCCGGAACTAGGCCTTTTTCGGATGAAATAGTTTTAAAATTAAAGCTCTCAATTTTACGGGGTGTAACC GAGTAGAATTGAGAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: PTS system EIIA component; Phosphotransferase enzyme IIA component [H]
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MEYGVVIVSHVSEIAQGVKRLIEQVAKDVPVTIAGGLENGDVGTDMQRIIQAFEDNSATKLLAFYDLGSAKMNLEMAIEM TDKEVKLYDTALVESAYTAAALLQVETKIEDVEAQLKDLKVK
Sequences:
>Translated_122_residues MEYGVVIVSHVSEIAQGVKRLIEQVAKDVPVTIAGGLENGDVGTDMQRIIQAFEDNSATKLLAFYDLGSAKMNLEMAIEM TDKEVKLYDTALVESAYTAAALLQVETKIEDVEAQLKDLKVK >Mature_122_residues MEYGVVIVSHVSEIAQGVKRLIEQVAKDVPVTIAGGLENGDVGTDMQRIIQAFEDNSATKLLAFYDLGSAKMNLEMAIEM TDKEVKLYDTALVESAYTAAALLQVETKIEDVEAQLKDLKVK
Specific function: Phosphotransferase subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. DhaM serves as the phosphoryl donor [H]
COG id: COG3412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-4 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012844 - InterPro: IPR004701 [H]
Pfam domain/function: PF03610 EIIA-man [H]
EC number: NA
Molecular weight: Translated: 13334; Mature: 13334
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00018 EF_HAND_1 ; PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYGVVIVSHVSEIAQGVKRLIEQVAKDVPVTIAGGLENGDVGTDMQRIIQAFEDNSATK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEE LLAFYDLGSAKMNLEMAIEMTDKEVKLYDTALVESAYTAAALLQVETKIEDVEAQLKDLK EEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VK CC >Mature Secondary Structure MEYGVVIVSHVSEIAQGVKRLIEQVAKDVPVTIAGGLENGDVGTDMQRIIQAFEDNSATK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEE LLAFYDLGSAKMNLEMAIEMTDKEVKLYDTALVESAYTAAALLQVETKIEDVEAQLKDLK EEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]