| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is dgkA [H]
Identifier: 116492867
GI number: 116492867
Start: 1105540
End: 1105929
Strand: Reverse
Name: dgkA [H]
Synonym: PEPE_1105
Alternate gene names: 116492867
Gene position: 1105929-1105540 (Counterclockwise)
Preceding gene: 116492868
Following gene: 116492866
Centisome position: 60.35
GC content: 37.95
Gene sequence:
>390_bases ATGCCTATGGCCTCAAGCGATAAGCATCAAACGAAAAAAAATCGTTCAATCTTCCAATCTGTAGGCCACGCGGGCCATGG ATTGTGGGAAGTGTTTAATACTGAACGTAATTTCCGTTATCACTTGATGATTATGGTTGTCATTATTATTGCGGGATTTA TTTTTGCATTAAATTTGTTGGAATGGATTATGGTTTTAGGATGCATTGCAGCAGTTTTGGTTGCTGAGATTTTAAATTCG GCCATTGAACGATTAGCAGATTTAGCTGCTGACGGTAAATTCCACCCGTTAATTAAGCAAGCAAAAGATATTGCAGCTAG TGGTGTGCTTGTCACAGCGCTATTTGCGGCCATAATTGGGTTATTAATTTTTGGTAATAAGTTATTCTAA
Upstream 100 bases:
>100_bases GGCTTTTTATGTGTTCATGGTTTCCTTCATTTAAATGGATATGACCATATGGAAAAAGAAGACCAAGAAAAGATGTTCCC CCTTCAAAAAGAAATTATGA
Downstream 100 bases:
>100_bases ATTAAAGAAACGGATATAAAATATGGAAGAAAACAATCAAGCATTTCACTCAGGATTTGTTGCTATTGTAGGGCGTCCTA ATGTAGGAAAATCAACATTT
Product: diacylglycerol kinase
Products: NA
Alternate protein names: UdpK [H]
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPMASSDKHQTKKNRSIFQSVGHAGHGLWEVFNTERNFRYHLMIMVVIIIAGFIFALNLLEWIMVLGCIAAVLVAEILNS AIERLADLAADGKFHPLIKQAKDIAASGVLVTALFAAIIGLLIFGNKLF
Sequences:
>Translated_129_residues MPMASSDKHQTKKNRSIFQSVGHAGHGLWEVFNTERNFRYHLMIMVVIIIAGFIFALNLLEWIMVLGCIAAVLVAEILNS AIERLADLAADGKFHPLIKQAKDIAASGVLVTALFAAIIGLLIFGNKLF >Mature_128_residues PMASSDKHQTKKNRSIFQSVGHAGHGLWEVFNTERNFRYHLMIMVVIIIAGFIFALNLLEWIMVLGCIAAVLVAEILNSA IERLADLAADGKFHPLIKQAKDIAASGVLVTALFAAIIGLLIFGNKLF
Specific function: Catalyzes the phosphorylation of undecaprenol, which is probably the primary physiological substrate. Is also able to phosphorylate diacylglycerol, albeit with very low efficiency. May play a role in adaptability to environmental stress conditions such as
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.66 [H]
Molecular weight: Translated: 14162; Mature: 14031
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMASSDKHQTKKNRSIFQSVGHAGHGLWEVFNTERNFRYHLMIMVVIIIAGFIFALNLL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EWIMVLGCIAAVLVAEILNSAIERLADLAADGKFHPLIKQAKDIAASGVLVTALFAAIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIFGNKLF HHHHCCCCC >Mature Secondary Structure PMASSDKHQTKKNRSIFQSVGHAGHGLWEVFNTERNFRYHLMIMVVIIIAGFIFALNLL CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EWIMVLGCIAAVLVAEILNSAIERLADLAADGKFHPLIKQAKDIAASGVLVTALFAAIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIFGNKLF HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407794; 9422608; 12397186 [H]