Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492794
Identifier: 116492794
GI number: 116492794
Start: 1025935
End: 1026135
Strand: Reverse
Name: 116492794
Synonym: PEPE_1031
Alternate gene names: NA
Gene position: 1026135-1025935 (Counterclockwise)
Preceding gene: 116492795
Following gene: 116492792
Centisome position: 56.0
GC content: 32.84
Gene sequence:
>201_bases ATGAATATTCAAGAAGCAGTAAAGCAATCGCTTAAAACGGGCAAGCAGTTTTACCGTAAGAGTGAAGGGGATCAACTAAC ATTTGAAGTTTCTAAATCAAATCGATGCATAGATATATATAGAAATGGAGAAAAAATTTATAGTTGGTGGAATCCAAGAG ATAACGATTTGATGGCAAATGATTGGAAAATAAAAGAGTAG
Upstream 100 bases:
>100_bases AAAGGAACATGGAATACTACCAATGATTGAAATGAAAGATGAGTCAGCGGTGTAGTTAAGTCGATAATTTGATGAATAAA TAACAGAAAAGGAGAACTAA
Downstream 100 bases:
>100_bases TTCCTAATGGAACCGCCCTTGATATTACTTAGTAGGAACTTTTGTTGAGATTAAAATATCAGTCAACAAATCACTACCAA ATTGTAGTTCGATAAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKIYSWWNPRDNDLMANDWKIKE
Sequences:
>Translated_66_residues MNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKIYSWWNPRDNDLMANDWKIKE >Mature_66_residues MNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKIYSWWNPRDNDLMANDWKIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7946; Mature: 7946
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKIYSWWNPRDNDLMAN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEECC DWKIKE CEEECC >Mature Secondary Structure MNIQEAVKQSLKTGKQFYRKSEGDQLTFEVSKSNRCIDIYRNGEKIYSWWNPRDNDLMAN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEECC DWKIKE CEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA