Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492791
Identifier: 116492791
GI number: 116492791
Start: 1025153
End: 1025362
Strand: Reverse
Name: 116492791
Synonym: PEPE_1028
Alternate gene names: NA
Gene position: 1025362-1025153 (Counterclockwise)
Preceding gene: 116492792
Following gene: 116492790
Centisome position: 55.96
GC content: 33.33
Gene sequence:
>210_bases ATGGCAGTAAACGAAAACAGATTATCTGATGACAAGTATCCAATGCTAATGGACAAAAAAACAGTAGCAGAATATTTAGG AGTTTCTAAAAGTTCAGTTGATGTTTTTCTTTTAAACGACAACTTGAGTGCAGCAGCTTTTGAACCTAGCAAGCTTAAGC GAAACTTTTTTATCAAAACGAAAGTTAATAAATGGCTGGAGGAATTGTAA
Upstream 100 bases:
>100_bases GGGAAAATAATATGAACAAATTAGTAATTATGAAAGACCAACAAGCAGTAACGACTAGCTTACAAGTAGCAGACGGACAA ACAACGTTAGGAGCGTAGAT
Downstream 100 bases:
>100_bases TGGTTGTATCAGTAAGTTTAGGGCAATTAGCGTTTTATCTAATCTCAGTAGTAGTGGCTGGATTAATTGGTCACTCAATT AAAAGAGGTGAGAAGTAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAVNENRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSAAAFEPSKLKRNFFIKTKVNKWLEEL
Sequences:
>Translated_69_residues MAVNENRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSAAAFEPSKLKRNFFIKTKVNKWLEEL >Mature_68_residues AVNENRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSAAAFEPSKLKRNFFIKTKVNKWLEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7942; Mature: 7811
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNENRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSAAAFEPSKLKRNFFIKT CCCCCCCCCCCCCCEEECHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCCEEEEEE KVNKWLEEL HHHHHHHCC >Mature Secondary Structure AVNENRLSDDKYPMLMDKKTVAEYLGVSKSSVDVFLLNDNLSAAAFEPSKLKRNFFIKT CCCCCCCCCCCCCEEECHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCCEEEEEE KVNKWLEEL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA