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The map label for this gene is ssb3 [H]

Identifier: 116492784

GI number: 116492784

Start: 1022834

End: 1023232

Strand: Reverse

Name: ssb3 [H]

Synonym: PEPE_1021

Alternate gene names: 116492784

Gene position: 1023232-1022834 (Counterclockwise)

Preceding gene: 116492785

Following gene: 116492783

Centisome position: 55.84

GC content: 36.09

Gene sequence:

>399_bases
ATGCGACAGATAACTATATCTGGAAATATTGGCAATGATGTACAAGTTAACTCAACTCAAAGTGGAAACAAAGTGGCTAA
CTTTAATGTGGCTGTACGACAGAATCGACCTGATAATAACGGAGAATATGGTACTGACTGGTTTAGATGCTCAGTATGGG
GAACGAGAGCTATTACAGTAGAAAAATTCTACAAAAAGGGTAGCCATGTAGTAGTAACTGGAAGTTTGTCAATTAATGAA
TATAACGGTAAAACACAGCTTCAAATTGACGTATCAGACTTCGACTTACCAGATAACCGCAATACAAATAATGCTAATTC
AACAAAGAGGAATAGCAATAATTCATTTAACAATGGTGGACAATCAATCGATATTTCAGATGATCAGCTCCCCTTCTAA

Upstream 100 bases:

>100_bases
CAGATTCCATTGAAAAATTACAGGAAGATACTGCAATCGGATTAATCGAATTGGTAACTAACCAACTTAATAAACAGACA
GAGAAAGCGGGTAAGTAATT

Downstream 100 bases:

>100_bases
GGTGATGTAAATGCAGAGAGCAAGAGCGGAACAACGAGGCAGAGATTTGGTGATTCATCTCGATAGACCACTGAATCAAG
ATCACTTGGAAACTGTTAGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 3; Helix-destabilizing protein 3 [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGTDWFRCSVWGTRAITVEKFYKKGSHVVVTGSLSINE
YNGKTQLQIDVSDFDLPDNRNTNNANSTKRNSNNSFNNGGQSIDISDDQLPF

Sequences:

>Translated_132_residues
MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGTDWFRCSVWGTRAITVEKFYKKGSHVVVTGSLSINE
YNGKTQLQIDVSDFDLPDNRNTNNANSTKRNSNNSFNNGGQSIDISDDQLPF
>Mature_132_residues
MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGTDWFRCSVWGTRAITVEKFYKKGSHVVVTGSLSINE
YNGKTQLQIDVSDFDLPDNRNTNNANSTKRNSNNSFNNGGQSIDISDDQLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14650; Mature: 14650

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGTDWFRCSVWGTRAITV
CEEEEEECCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEE
EKFYKKGSHVVVTGSLSINEYNGKTQLQIDVSDFDLPDNRNTNNANSTKRNSNNSFNNGG
EHHHHCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSIDISDDQLPF
CEEECCCCCCCC
>Mature Secondary Structure
MRQITISGNIGNDVQVNSTQSGNKVANFNVAVRQNRPDNNGEYGTDWFRCSVWGTRAITV
CEEEEEECCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEE
EKFYKKGSHVVVTGSLSINEYNGKTQLQIDVSDFDLPDNRNTNNANSTKRNSNNSFNNGG
EHHHHCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSIDISDDQLPF
CEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12200547 [H]