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The map label for this gene is yqaN [H]

Identifier: 116492779

GI number: 116492779

Start: 1020076

End: 1020486

Strand: Reverse

Name: yqaN [H]

Synonym: PEPE_1016

Alternate gene names: 116492779

Gene position: 1020486-1020076 (Counterclockwise)

Preceding gene: 116492780

Following gene: 116492778

Centisome position: 55.69

GC content: 39.66

Gene sequence:

>411_bases
TTGATTAAATTAACAATTCCAAGCGAACCAATAGCGCAAGGGCGTCCAAGGTTTGTTAGTCGAGGTAAGTTTGTAAGCAC
GTATGATCCACCTAAATCAAAAGCGTACAAGGAACTAGTAGCGCAATACGCTAGAGAACAGTACCACGGTAAGCTTTTAG
AGGGTCAGTTGTATGTTGTGTTAAATGTATTTAGATCAGTGCAAAAGAGTATATCAAAAGCAGAACGTGCTAGGAGGCTA
TCAGGAGTTCATAGACCGACTGTAAAACCAGATATAGATAATTACTTTAAAGCAGTGACAGATGCTTGCACGGGGATTAT
ATGGAGAGATGACGCCTTAATAACAGACGTTAAGATGGGAAAATTCTATTCAGAAGAACCACGAGTAGAAATTTATGTGG
AGGAGCTATGA

Upstream 100 bases:

>100_bases
AGGAACTGGAAGGGTTTATGTTGAAAGCCCAATTGGAGTGCAAGTTAATCCGTGCCCTAAATGTAATAAGGCTTACCGCA
AGAGAAAAGGATACGAGTAA

Downstream 100 bases:

>100_bases
ATTTTAAAAATTTAACTAGTGAAGAACTTATTGTAGCTAATTTTATTAACGAAACTTTTGAAGAGCACAATCAAAACATG
ATAAGTACTATTGTTTGGAT

Product: Holliday junction resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYVVLNVFRSVQKSISKAERARRL
SGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMGKFYSEEPRVEIYVEEL

Sequences:

>Translated_136_residues
MIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYVVLNVFRSVQKSISKAERARRL
SGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMGKFYSEEPRVEIYVEEL
>Mature_136_residues
MIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYVVLNVFRSVQKSISKAERARRL
SGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMGKFYSEEPRVEIYVEEL

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008822 [H]

Pfam domain/function: PF05866 RusA [H]

EC number: NA

Molecular weight: Translated: 15639; Mature: 15639

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYVV
CEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHH
LNVFRSVQKSISKAERARRLSGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEECCCCEEEHHHHC
KFYSEEPRVEIYVEEL
CCCCCCCCEEEEEECC
>Mature Secondary Structure
MIKLTIPSEPIAQGRPRFVSRGKFVSTYDPPKSKAYKELVAQYAREQYHGKLLEGQLYVV
CEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHH
LNVFRSVQKSISKAERARRLSGVHRPTVKPDIDNYFKAVTDACTGIIWRDDALITDVKMG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEECCCCEEEHHHHC
KFYSEEPRVEIYVEEL
CCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]