| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492777
Identifier: 116492777
GI number: 116492777
Start: 1019711
End: 1019851
Strand: Reverse
Name: 116492777
Synonym: PEPE_1014
Alternate gene names: NA
Gene position: 1019851-1019711 (Counterclockwise)
Preceding gene: 116492778
Following gene: 116492776
Centisome position: 55.66
GC content: 34.04
Gene sequence:
>141_bases ATGAAAAGACTTACAGAAATGACAACAGAGGATATTATCCGTGAATTGTACGGCAATGATTATACTTTGCAAGAATTAGA TCGGATTAAAGAAGCACTTGAAGAACAGTATCAAGAATGGCGTAAACGCAATTTTAACTAG
Upstream 100 bases:
>100_bases CAACCAGCGTCCAGACGTACACAGAGCGATGAACAATTTAACAAACAAGCAGTTTAACCGTGTGATTGCAGAAATACTAT TACCATTTTAGGAGGAATTT
Downstream 100 bases:
>100_bases GGGGAACGAAAACAATGTACGTAATCAAAAACACAGCTAATGGAAGATATTACCGAAAGTTAGGAGTAGAAACACACCAA TATGTGGGTATCGAAAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MKRLTEMTTEDIIRELYGNDYTLQELDRIKEALEEQYQEWRKRNFN
Sequences:
>Translated_46_residues MKRLTEMTTEDIIRELYGNDYTLQELDRIKEALEEQYQEWRKRNFN >Mature_46_residues MKRLTEMTTEDIIRELYGNDYTLQELDRIKEALEEQYQEWRKRNFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5812; Mature: 5812
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLTEMTTEDIIRELYGNDYTLQELDRIKEALEEQYQEWRKRNFN CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRLTEMTTEDIIRELYGNDYTLQELDRIKEALEEQYQEWRKRNFN CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA