Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492740

Identifier: 116492740

GI number: 116492740

Start: 986030

End: 988075

Strand: Reverse

Name: 116492740

Synonym: PEPE_0977

Alternate gene names: NA

Gene position: 988075-986030 (Counterclockwise)

Preceding gene: 116492741

Following gene: 116492739

Centisome position: 53.92

GC content: 37.93

Gene sequence:

>2046_bases
ATGAAAAAAGTTAAAGATTTGTTATTAGTGGCTTTTCTCGTAAGTTTCTGCTGGATAGCCACTGACGTAAAGGCTAGCTT
GAAGCCATTATCTAATCTTGAAAATTTTCAGTGGGCCAATCAAGCAGTTACGCCAGCTGAAAATACCTTTATAATGCATA
GTGGTGCTCGAACGAAGGTGACTCCTTTAAAGGGCGATGCTACCACGAATCGGCTATCAGTTGATCAGAAAATAAATGTG
AGTCAGGCCCTCGTAGAAAATGTTGGGTTTTATCAAGGTAAATCTGTAAATTTGCTGGTAACGTTGAAACGAAATAAAAG
TAATTTAAAGGGTGGATCACTAAGCTTTGCTAAGGATTATTTTTTTGGAATTGATATTGCTGGTGAGGTAATGGTTACTT
ATCAATTTGTTGACGCCAATCAAAATCCTCTGACGATTAAAACAGCATTTAATTACTTCGGCCTTAATTCTAACAAGTAC
ATTGGATACCAAGATTGCAATTCTGTGATTAGTGCAGTTTACGCTAATAACCCGACTAATATTAGGTATGAATCAGAAGA
TCAATGGATGTATTTAAAAAATACTACAGTTGGGCTTCCGTGGCGAGATCCGCGCCAAAGTTTTGAAGTAGTTACTAAAC
CCATTTTCCAAGTTACTTTTGTGGTACACAATAATGACAGTACACCTTCATCGTTAGTTTATTTAACTGAATTTTTAGCA
AGGCCTGAGTCTGCGCCAGCTTATGCGGAAAGTAGCGATTTTAACCAAGCTAATAATGGCGTCTATTTGGCAGCTCAACA
GACGGTACCTAGTACTAATAGTTTCACATCTGAGGTTAGTTTTAATTTGGAACATGTTTATAATAGTGAACAATATATTC
CAGAACGGATTAAAGTTACTAATTTTGATGGGAAAGATGTAACGCAATACTTTGATTGGCGAATTGAGAATCAGAAAGTC
TACATCAAGACTAGGCCAGCTGCTACTAGAGCAATAACCGATACTACGTTGCATTATAAAGTATATTTAAAGTGGCTTGA
AGCTAAAAAAACTGTAGATCCAACTCGGGTTGTTAACGGAAAATTAGATTTACCGTTTGACGTATCAACGAACATCAATG
GGCAAGCTGTAGGTAAAAGTAGCGCAGTTTCGACTGTAGACTATGTTGGTAGGGTGAATGTTGTTTTTTTAGCGGACAAT
GGTTTCGAGGTACTTCGCGCTCGAGAAGTTAAAAGTGGCATTTTAACCACGAAATTTGACGTGACTGATATATATCCTGA
AATTGCAGGTTACATTCCCATCAAGAATGATGCAGTTCAAGATACTGGTACATTCTTACCAGGAAATAAAACAATCATTC
ACCGGTACCGTAAAGGCGAAAAACTTAGTTTTAAACTAAAAAATCTAGGAGATACACTCTATAGTTCACGATTTTCTAAT
CAAAGCAAACTTACAGTTTCCTTTACGCACGAAGATGGAGCAAAAGTTAGATTGGTAGGAAACTGCGCGGGAGAAAAGCG
AATACTAAAAGAGTATTCCAACGCTGCTCATCAGGTTGATGATGAAATTATATGCCAATTTCCAAAGTCATGGATTAATA
AGAAGGTAGATTTTTACCTCGAAGATGACCAACATCAAATGTCGAATAAAGAAACTCGGATAATTAAACAAGAACGCGGA
CCGGAGCTGTCATTACCTAGTAAAATCGACTTTGGTTCGCACGAAATTCCGCTGGAAATTACGGTCTGTTCACTAACTAG
AGCAGAGTGGGTACATGTTAAAGATCGTAGTGAGCTTGACCACTACCCGTGGATTTTAAAGGTTCGAGAAGAACATCCAC
TAACTAACCAAAACGACCAGAAGCTTATATCAAGGCTTTATTTTAAGGGTAACGTAATCAACGGAGAAAATCAGACGATT
GGGCAAGATACTGGGAACTTAAATTTAGATTTAAGCCAGTATCTCCAACTGGTGCTAGAACCTACGGATCAAATTGGTAG
TTACCATGGTGAATTAAGATGGACATTGGAAGATGCCCCCAACTGA

Upstream 100 bases:

>100_bases
GATATTGCGATGGGGATGGTTTGGATTGGGTTAGGTTTGATTTGCTATACACTGATCAAAAATGGAATTAAAAAAATTCT
TGTAGGTAAGAGGACGACTA

Downstream 100 bases:

>100_bases
TTGATATTTTTTCAAGCAAGCTGAATCAGAAACTTCATGAGACTAGTTAACCAATCCTTTAGTTTTGGTTAGCTAGTTTT
TTAGTTCCCAGAGATTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MKKVKDLLLVAFLVSFCWIATDVKASLKPLSNLENFQWANQAVTPAENTFIMHSGARTKVTPLKGDATTNRLSVDQKINV
SQALVENVGFYQGKSVNLLVTLKRNKSNLKGGSLSFAKDYFFGIDIAGEVMVTYQFVDANQNPLTIKTAFNYFGLNSNKY
IGYQDCNSVISAVYANNPTNIRYESEDQWMYLKNTTVGLPWRDPRQSFEVVTKPIFQVTFVVHNNDSTPSSLVYLTEFLA
RPESAPAYAESSDFNQANNGVYLAAQQTVPSTNSFTSEVSFNLEHVYNSEQYIPERIKVTNFDGKDVTQYFDWRIENQKV
YIKTRPAATRAITDTTLHYKVYLKWLEAKKTVDPTRVVNGKLDLPFDVSTNINGQAVGKSSAVSTVDYVGRVNVVFLADN
GFEVLRAREVKSGILTTKFDVTDIYPEIAGYIPIKNDAVQDTGTFLPGNKTIIHRYRKGEKLSFKLKNLGDTLYSSRFSN
QSKLTVSFTHEDGAKVRLVGNCAGEKRILKEYSNAAHQVDDEIICQFPKSWINKKVDFYLEDDQHQMSNKETRIIKQERG
PELSLPSKIDFGSHEIPLEITVCSLTRAEWVHVKDRSELDHYPWILKVREEHPLTNQNDQKLISRLYFKGNVINGENQTI
GQDTGNLNLDLSQYLQLVLEPTDQIGSYHGELRWTLEDAPN

Sequences:

>Translated_681_residues
MKKVKDLLLVAFLVSFCWIATDVKASLKPLSNLENFQWANQAVTPAENTFIMHSGARTKVTPLKGDATTNRLSVDQKINV
SQALVENVGFYQGKSVNLLVTLKRNKSNLKGGSLSFAKDYFFGIDIAGEVMVTYQFVDANQNPLTIKTAFNYFGLNSNKY
IGYQDCNSVISAVYANNPTNIRYESEDQWMYLKNTTVGLPWRDPRQSFEVVTKPIFQVTFVVHNNDSTPSSLVYLTEFLA
RPESAPAYAESSDFNQANNGVYLAAQQTVPSTNSFTSEVSFNLEHVYNSEQYIPERIKVTNFDGKDVTQYFDWRIENQKV
YIKTRPAATRAITDTTLHYKVYLKWLEAKKTVDPTRVVNGKLDLPFDVSTNINGQAVGKSSAVSTVDYVGRVNVVFLADN
GFEVLRAREVKSGILTTKFDVTDIYPEIAGYIPIKNDAVQDTGTFLPGNKTIIHRYRKGEKLSFKLKNLGDTLYSSRFSN
QSKLTVSFTHEDGAKVRLVGNCAGEKRILKEYSNAAHQVDDEIICQFPKSWINKKVDFYLEDDQHQMSNKETRIIKQERG
PELSLPSKIDFGSHEIPLEITVCSLTRAEWVHVKDRSELDHYPWILKVREEHPLTNQNDQKLISRLYFKGNVINGENQTI
GQDTGNLNLDLSQYLQLVLEPTDQIGSYHGELRWTLEDAPN
>Mature_681_residues
MKKVKDLLLVAFLVSFCWIATDVKASLKPLSNLENFQWANQAVTPAENTFIMHSGARTKVTPLKGDATTNRLSVDQKINV
SQALVENVGFYQGKSVNLLVTLKRNKSNLKGGSLSFAKDYFFGIDIAGEVMVTYQFVDANQNPLTIKTAFNYFGLNSNKY
IGYQDCNSVISAVYANNPTNIRYESEDQWMYLKNTTVGLPWRDPRQSFEVVTKPIFQVTFVVHNNDSTPSSLVYLTEFLA
RPESAPAYAESSDFNQANNGVYLAAQQTVPSTNSFTSEVSFNLEHVYNSEQYIPERIKVTNFDGKDVTQYFDWRIENQKV
YIKTRPAATRAITDTTLHYKVYLKWLEAKKTVDPTRVVNGKLDLPFDVSTNINGQAVGKSSAVSTVDYVGRVNVVFLADN
GFEVLRAREVKSGILTTKFDVTDIYPEIAGYIPIKNDAVQDTGTFLPGNKTIIHRYRKGEKLSFKLKNLGDTLYSSRFSN
QSKLTVSFTHEDGAKVRLVGNCAGEKRILKEYSNAAHQVDDEIICQFPKSWINKKVDFYLEDDQHQMSNKETRIIKQERG
PELSLPSKIDFGSHEIPLEITVCSLTRAEWVHVKDRSELDHYPWILKVREEHPLTNQNDQKLISRLYFKGNVINGENQTI
GQDTGNLNLDLSQYLQLVLEPTDQIGSYHGELRWTLEDAPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77158; Mature: 77158

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVKDLLLVAFLVSFCWIATDVKASLKPLSNLENFQWANQAVTPAENTFIMHSGARTKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEE
TPLKGDATTNRLSVDQKINVSQALVENVGFYQGKSVNLLVTLKRNKSNLKGGSLSFAKDY
EECCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHHE
FFGIDIAGEVMVTYQFVDANQNPLTIKTAFNYFGLNSNKYIGYQDCNSVISAVYANNPTN
EEEEEECCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEECHHHHHHHHHHHHCCCCCC
IRYESEDQWMYLKNTTVGLPWRDPRQSFEVVTKPIFQVTFVVHNNDSTPSSLVYLTEFLA
EEECCCCCEEEEECCEEECCCCCHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHH
RPESAPAYAESSDFNQANNGVYLAAQQTVPSTNSFTSEVSFNLEHVYNSEQYIPERIKVT
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHCCCCCCCCCCEEEEE
NFDGKDVTQYFDWRIENQKVYIKTRPAATRAITDTTLHYKVYLKWLEAKKTVDPTRVVNG
CCCCCHHHHEECEEECCCEEEEEECCCCCEEEECCEEEEEEEEEEHHHHCCCCCCEEECC
KLDLPFDVSTNINGQAVGKSSAVSTVDYVGRVNVVFLADNGFEVLRAREVKSGILTTKFD
CCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEC
VTDIYPEIAGYIPIKNDAVQDTGTFLPGNKTIIHRYRKGEKLSFKLKNLGDTLYSSRFSN
HHHHCHHHHCEEECCCCCCCCCCCCCCCCHHEEEEECCCCEEEEEEHHHCHHHHHHHCCC
QSKLTVSFTHEDGAKVRLVGNCAGEKRILKEYSNAAHQVDDEIICQFPKSWINKKVDFYL
CCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCEEEEE
EDDQHQMSNKETRIIKQERGPELSLPSKIDFGSHEIPLEITVCSLTRAEWVHVKDRSELD
CCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCC
HYPWILKVREEHPLTNQNDQKLISRLYFKGNVINGENQTIGQDTGNLNLDLSQYLQLVLE
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEHHHHHHHHHC
PTDQIGSYHGELRWTLEDAPN
CCHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKKVKDLLLVAFLVSFCWIATDVKASLKPLSNLENFQWANQAVTPAENTFIMHSGARTKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEE
TPLKGDATTNRLSVDQKINVSQALVENVGFYQGKSVNLLVTLKRNKSNLKGGSLSFAKDY
EECCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEHHHE
FFGIDIAGEVMVTYQFVDANQNPLTIKTAFNYFGLNSNKYIGYQDCNSVISAVYANNPTN
EEEEEECCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEECHHHHHHHHHHHHCCCCCC
IRYESEDQWMYLKNTTVGLPWRDPRQSFEVVTKPIFQVTFVVHNNDSTPSSLVYLTEFLA
EEECCCCCEEEEECCEEECCCCCHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHH
RPESAPAYAESSDFNQANNGVYLAAQQTVPSTNSFTSEVSFNLEHVYNSEQYIPERIKVT
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHCCCCCCCCCCEEEEE
NFDGKDVTQYFDWRIENQKVYIKTRPAATRAITDTTLHYKVYLKWLEAKKTVDPTRVVNG
CCCCCHHHHEECEEECCCEEEEEECCCCCEEEECCEEEEEEEEEEHHHHCCCCCCEEECC
KLDLPFDVSTNINGQAVGKSSAVSTVDYVGRVNVVFLADNGFEVLRAREVKSGILTTKFD
CCCCCEECCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEC
VTDIYPEIAGYIPIKNDAVQDTGTFLPGNKTIIHRYRKGEKLSFKLKNLGDTLYSSRFSN
HHHHCHHHHCEEECCCCCCCCCCCCCCCCHHEEEEECCCCEEEEEEHHHCHHHHHHHCCC
QSKLTVSFTHEDGAKVRLVGNCAGEKRILKEYSNAAHQVDDEIICQFPKSWINKKVDFYL
CCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCEEEEE
EDDQHQMSNKETRIIKQERGPELSLPSKIDFGSHEIPLEITVCSLTRAEWVHVKDRSELD
CCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCC
HYPWILKVREEHPLTNQNDQKLISRLYFKGNVINGENQTIGQDTGNLNLDLSQYLQLVLE
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEHHHHHHHHHC
PTDQIGSYHGELRWTLEDAPN
CCHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA