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The map label for this gene is 116492665

Identifier: 116492665

GI number: 116492665

Start: 901537

End: 902007

Strand: Reverse

Name: 116492665

Synonym: PEPE_0899

Alternate gene names: NA

Gene position: 902007-901537 (Counterclockwise)

Preceding gene: 116492671

Following gene: 116492664

Centisome position: 49.23

GC content: 34.61

Gene sequence:

>471_bases
ATGCAAACCAAAAGTAAATGGATTCAATTAATTATTGCGGTAGTTGGAGTAGAACTAATCGGCTCATTATCTGGATTATT
AGCTGGCGACATCAAAGCCATCTATAATAGCTTTACTTTGCCACCATTCTCACCACCAGATCGTTTATTTGGTATCGTGT
GGCCAATTTTATACTTAATGATTGGTATCGTTGGCTACCTAATTTTCACAGTTAGGAGTAACTACCGCAAAACAAACCTA
ACATTATTTATTGCCCAACTTTTCTTGAATTTTATTTGGAGTATTGTATTTTTCAACGCAAGTAGTCGTTGGACCGGACT
ATTAATCATTCTTGTATTAGACGTACTAGTATTCTTTTGTATCAAGGAATTTTATAAGAGTAGCAAATTGGCAGCCTACT
TAATGATTCCGTATTTCCTTTGGATTTTATTTGCTACTTACCTAACCTTAGGAACAGCCATTCTTAACTAA

Upstream 100 bases:

>100_bases
TGATTTCACTACCCTAAGCAAAATATTATATTCTCTCCTCTACTTTTGGTAAGCTAACCTTAATGAGATAGGTTTCACAA
AATATAAGGGAGGGATTTTT

Downstream 100 bases:

>100_bases
CTTTCTGTCATTGAATCATTTGGTAGTAAAATTATCAATTTACTTGTAAGCGTATTTTTAGGTATATTCAATTAACTTTG
CTAGAATTAAGTTGTTCCAA

Product: tryptophan-rich sensory protein

Products: NA

Alternate protein names: TspO And MBR Like Protein; Integral Membrane Protein; TspO/MBR Family Protein; TspO And MBR Like Proteins; Sensory Protein; CrtK Protein; Benzodiazepine Receptor TspO; Benzodiazepine Receptor/Sensory Transduction Protein; TpsO Family Regulatory Protein; Peripheral-Type Benzodiazepine Receptor; TspO And MBR Related Proteins; Tryptophan-Rich Sensory Protein TSPO-Like Protein; TspO/MBR-Related Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MQTKSKWIQLIIAVVGVELIGSLSGLLAGDIKAIYNSFTLPPFSPPDRLFGIVWPILYLMIGIVGYLIFTVRSNYRKTNL
TLFIAQLFLNFIWSIVFFNASSRWTGLLIILVLDVLVFFCIKEFYKSSKLAAYLMIPYFLWILFATYLTLGTAILN

Sequences:

>Translated_156_residues
MQTKSKWIQLIIAVVGVELIGSLSGLLAGDIKAIYNSFTLPPFSPPDRLFGIVWPILYLMIGIVGYLIFTVRSNYRKTNL
TLFIAQLFLNFIWSIVFFNASSRWTGLLIILVLDVLVFFCIKEFYKSSKLAAYLMIPYFLWILFATYLTLGTAILN
>Mature_156_residues
MQTKSKWIQLIIAVVGVELIGSLSGLLAGDIKAIYNSFTLPPFSPPDRLFGIVWPILYLMIGIVGYLIFTVRSNYRKTNL
TLFIAQLFLNFIWSIVFFNASSRWTGLLIILVLDVLVFFCIKEFYKSSKLAAYLMIPYFLWILFATYLTLGTAILN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19920472, Length=148, Percent_Identity=29.0540540540541, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17807; Mature: 17807

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKSKWIQLIIAVVGVELIGSLSGLLAGDIKAIYNSFTLPPFSPPDRLFGIVWPILYLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
IGIVGYLIFTVRSNYRKTNLTLFIAQLFLNFIWSIVFFNASSRWTGLLIILVLDVLVFFC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IKEFYKSSKLAAYLMIPYFLWILFATYLTLGTAILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTKSKWIQLIIAVVGVELIGSLSGLLAGDIKAIYNSFTLPPFSPPDRLFGIVWPILYLM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
IGIVGYLIFTVRSNYRKTNLTLFIAQLFLNFIWSIVFFNASSRWTGLLIILVLDVLVFFC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IKEFYKSSKLAAYLMIPYFLWILFATYLTLGTAILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA