Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492591

Identifier: 116492591

GI number: 116492591

Start: 829623

End: 829958

Strand: Reverse

Name: 116492591

Synonym: PEPE_0824

Alternate gene names: NA

Gene position: 829958-829623 (Counterclockwise)

Preceding gene: 116492603

Following gene: 116492519

Centisome position: 45.29

GC content: 35.42

Gene sequence:

>336_bases
ATGGAAAACAAAAAATTTAATAACTCTTTCAATCGAATTAATCACTCACTCAATAACATCCGTAAAATGTATAATAACTT
ATTCCTGGTCCCTGAAGACCAAGGTTTACCAATTATGGATCGTACAATGCCCATTGATCAAATTAATGATACCCTGGCAT
ATTCAATTCAAAACCACCTAGTAGTCCGCATGCAACTGGATTTAAAAAAATCAATCGTTGAAATCGATGGCTATATCCAG
ATTACCAGATCTGGACGACTATGCCTGACTGATCCTAAAACTGGGCTAACACAACTCTTAGAAGATCAACAAATTCGAAG
CATCGCCTTAATTTAA

Upstream 100 bases:

>100_bases
GCGCTACACCAACATTTATACCCAATTCATAAAAACAGTTGCTTTTAAGAACGCATGTTCGTATAATGTAAATACAAACA
AATGTTCGTTGGAGGCTAAC

Downstream 100 bases:

>100_bases
AAACTCTCACTATTAAACCGAAAATATCCCTAAGAATCAAGGTTATCTTTCAATTTGCTAGTGAGAGTTTTTTAGTGGGC
TTGTTCCGTTTTTAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MENKKFNNSFNRINHSLNNIRKMYNNLFLVPEDQGLPIMDRTMPIDQINDTLAYSIQNHLVVRMQLDLKKSIVEIDGYIQ
ITRSGRLCLTDPKTGLTQLLEDQQIRSIALI

Sequences:

>Translated_111_residues
MENKKFNNSFNRINHSLNNIRKMYNNLFLVPEDQGLPIMDRTMPIDQINDTLAYSIQNHLVVRMQLDLKKSIVEIDGYIQ
ITRSGRLCLTDPKTGLTQLLEDQQIRSIALI
>Mature_111_residues
MENKKFNNSFNRINHSLNNIRKMYNNLFLVPEDQGLPIMDRTMPIDQINDTLAYSIQNHLVVRMQLDLKKSIVEIDGYIQ
ITRSGRLCLTDPKTGLTQLLEDQQIRSIALI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12902; Mature: 12902

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKKFNNSFNRINHSLNNIRKMYNNLFLVPEDQGLPIMDRTMPIDQINDTLAYSIQNHL
CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHEECCCEE
VVRMQLDLKKSIVEIDGYIQITRSGRLCLTDPKTGLTQLLEDQQIRSIALI
EEEEEECHHHHHEEECCEEEEECCCCEEEECCCHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MENKKFNNSFNRINHSLNNIRKMYNNLFLVPEDQGLPIMDRTMPIDQINDTLAYSIQNHL
CCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHEECCCEE
VVRMQLDLKKSIVEIDGYIQITRSGRLCLTDPKTGLTQLLEDQQIRSIALI
EEEEEECHHHHHEEECCEEEEECCCCEEEECCCHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA