Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492434
Identifier: 116492434
GI number: 116492434
Start: 705289
End: 705573
Strand: Reverse
Name: 116492434
Synonym: PEPE_0666
Alternate gene names: NA
Gene position: 705573-705289 (Counterclockwise)
Preceding gene: 116492435
Following gene: 116492427
Centisome position: 38.51
GC content: 36.49
Gene sequence:
>285_bases ATGATTACAAGTACTGGTGATTTAAAAAAAAGGATTAACGCAAAGACTCCTAAAATTATTGTCTCAAAAGCCCTACTCTC CAAAAATAAATCTAACGACGCGAATGCGCCTTGGGTTGACGTTGGGTTTGCTGGATTAGCGGGCATCATCAGTACTGCAT CCCTTTTCTTGATGTCCTTTCTATCTCAAAAATGGAAAGCAGCTTACGTTCAAAAGAAACTGTATTACCGATATTCTGCT ATTTTAGAAGATGAGGATACAGTTACTTTCAACCTTAAAAAATAA
Upstream 100 bases:
>100_bases TCGAAAAATTAATTTTTAAATAAAATTAACACGGTTTATTTTTTCGATAGTGTTATAATGCAGGCGAGCAATTATATTTA ACTAGAAAGGATTGATCGCT
Downstream 100 bases:
>100_bases CTTATAATAAAAACCCTGCTATCTTTAGTTGATAGTAGGGTTTCTTGTTTAAATAAATCTATTTTGTTTTTCAGTGAAGC GAATGACGGGAATCGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MITSTGDLKKRINAKTPKIIVSKALLSKNKSNDANAPWVDVGFAGLAGIISTASLFLMSFLSQKWKAAYVQKKLYYRYSA ILEDEDTVTFNLKK
Sequences:
>Translated_94_residues MITSTGDLKKRINAKTPKIIVSKALLSKNKSNDANAPWVDVGFAGLAGIISTASLFLMSFLSQKWKAAYVQKKLYYRYSA ILEDEDTVTFNLKK >Mature_94_residues MITSTGDLKKRINAKTPKIIVSKALLSKNKSNDANAPWVDVGFAGLAGIISTASLFLMSFLSQKWKAAYVQKKLYYRYSA ILEDEDTVTFNLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10476; Mature: 10476
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSTGDLKKRINAKTPKIIVSKALLSKNKSNDANAPWVDVGFAGLAGIISTASLFLMSF CCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH LSQKWKAAYVQKKLYYRYSAILEDEDTVTFNLKK HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MITSTGDLKKRINAKTPKIIVSKALLSKNKSNDANAPWVDVGFAGLAGIISTASLFLMSF CCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH LSQKWKAAYVQKKLYYRYSAILEDEDTVTFNLKK HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA