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The map label for this gene is yurY [H]

Identifier: 116492287

GI number: 116492287

Start: 539991

End: 540752

Strand: Direct

Name: yurY [H]

Synonym: PEPE_0486

Alternate gene names: 116492287

Gene position: 539991-540752 (Clockwise)

Preceding gene: 116492286

Following gene: 116492288

Centisome position: 29.47

GC content: 40.16

Gene sequence:

>762_bases
ATGAGTACGCTATTAATTAAAGATTTAAAGGTGGTTGCCGGAGAGGAACCTATTCTTAACGGAGTAAATTTAGAAATTAA
AGCTGGTGAAGTACATGCGTTGATGGGTCCAAATGGGACAGGAAAATCAACCCTATCAGAAACCATCATGGGTAACCCGC
TCTATCAGATTGTGGAAGGACAAATCTTTTTAGATGGTCAAGATATTACAACTATGAGTGTGGATGAACGTGCTCGAGCA
GGAATGTTTTTAGCAATGCAATATCCGACGGAAGTTGTCGGAATTTCGAACGCTGATTTTATTCACGCGGCCTTAAATGC
GCGGAATGGAAATCAGCCAGTGGCCATTTTACCGTTTTTAAATGAACTAAAACAACAAATGGATTTTTTAGAAATCGATG
AAGACTACGCTGATCGGGGCTTAAATGCTGATTTTTCTGGTGGTGAAAAGAAACGCAATGAAATTTTACAAATGATGATG
CTGAAACCGAGCTTTGCCATTTTAGATGAAATTGATTCTGGTTTGGATATTGATGCTTTGCAAATTGTGGCTAAGGGAAT
CAATGCAATGCGAAGTGATGAATTTAGTTGCTTAATGGTGACTCATTATCAGCGTTTATTAAATTATGTGGTTCCTGATG
TGGTCCACATTATGATGGGCGGTAAAATTGTGAAAACGGGTGGTCCAGAACTCGCCCAAGAGCTAGAAAAAACGGGTTAT
GCCGATTTAAGTGGTGCCGTGGAGGGGAGCGATAACGATTGA

Upstream 100 bases:

>100_bases
GGAAGTGCCAACCAAAGAATCATTGACGTCCCTAAATCGTTAAAAGAAAATCGGGTAATTATTTGGGATAAGCTAATTCG
ATAAATGGGGATGATATAGG

Downstream 100 bases:

>100_bases
AACAAAATTAGAATCGCCAACTAAATATCCGAAAATTATGGGGATTAAATATGATCCTCAAAATTTTAGCTATGCATCGA
TGACAACGACGAAGTGGTCG

Product: Fe-S cluster assembly ABC-type transport system, ATPase component

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSTLLIKDLKVVAGEEPILNGVNLEIKAGEVHALMGPNGTGKSTLSETIMGNPLYQIVEGQIFLDGQDITTMSVDERARA
GMFLAMQYPTEVVGISNADFIHAALNARNGNQPVAILPFLNELKQQMDFLEIDEDYADRGLNADFSGGEKKRNEILQMMM
LKPSFAILDEIDSGLDIDALQIVAKGINAMRSDEFSCLMVTHYQRLLNYVVPDVVHIMMGGKIVKTGGPELAQELEKTGY
ADLSGAVEGSDND

Sequences:

>Translated_253_residues
MSTLLIKDLKVVAGEEPILNGVNLEIKAGEVHALMGPNGTGKSTLSETIMGNPLYQIVEGQIFLDGQDITTMSVDERARA
GMFLAMQYPTEVVGISNADFIHAALNARNGNQPVAILPFLNELKQQMDFLEIDEDYADRGLNADFSGGEKKRNEILQMMM
LKPSFAILDEIDSGLDIDALQIVAKGINAMRSDEFSCLMVTHYQRLLNYVVPDVVHIMMGGKIVKTGGPELAQELEKTGY
ADLSGAVEGSDND
>Mature_252_residues
STLLIKDLKVVAGEEPILNGVNLEIKAGEVHALMGPNGTGKSTLSETIMGNPLYQIVEGQIFLDGQDITTMSVDERARAG
MFLAMQYPTEVVGISNADFIHAALNARNGNQPVAILPFLNELKQQMDFLEIDEDYADRGLNADFSGGEKKRNEILQMMML
KPSFAILDEIDSGLDIDALQIVAKGINAMRSDEFSCLMVTHYQRLLNYVVPDVVHIMMGGKIVKTGGPELAQELEKTGYA
DLSGAVEGSDND

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI255708477, Length=219, Percent_Identity=31.9634703196347, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI9961252, Length=228, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4505771, Length=228, Percent_Identity=27.1929824561404, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI42741659, Length=228, Percent_Identity=26.7543859649123, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI9961250, Length=235, Percent_Identity=26.8085106382979, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI9665248, Length=231, Percent_Identity=27.7056277056277, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=46.7213114754098, Blast_Score=233, Evalue=8e-63,
Organism=Escherichia coli, GI87081709, Length=224, Percent_Identity=29.0178571428571, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786698, Length=210, Percent_Identity=29.0476190476191, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=25.6637168141593, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787029, Length=222, Percent_Identity=28.3783783783784, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=27.8688524590164, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788165, Length=238, Percent_Identity=27.3109243697479, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787370, Length=223, Percent_Identity=28.6995515695067, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789891, Length=220, Percent_Identity=25.4545454545455, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=229, Percent_Identity=26.2008733624454, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787759, Length=224, Percent_Identity=26.7857142857143, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=28.310502283105, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=28.310502283105, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=28.310502283105, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17541710, Length=238, Percent_Identity=26.890756302521, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25146777, Length=217, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=225, Percent_Identity=29.7777777777778, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=224, Percent_Identity=29.4642857142857, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=220, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=223, Percent_Identity=28.2511210762332, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=215, Percent_Identity=28.3720930232558, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=189, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI281363262, Length=231, Percent_Identity=29.8701298701299, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24653245, Length=231, Percent_Identity=29.8701298701299, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17136662, Length=212, Percent_Identity=28.3018867924528, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27553; Mature: 27422

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLIKDLKVVAGEEPILNGVNLEIKAGEVHALMGPNGTGKSTLSETIMGNPLYQIVEG
CCCEEHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCC
QIFLDGQDITTMSVDERARAGMFLAMQYPTEVVGISNADFIHAALNARNGNQPVAILPFL
EEEECCCCCEEEEHHHHHHCCEEEEEECCCEEEECCCCCCEEEEECCCCCCCCEEEHHHH
NELKQQMDFLEIDEDYADRGLNADFSGGEKKRNEILQMMMLKPSFAILDEIDSGLDIDAL
HHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHH
QIVAKGINAMRSDEFSCLMVTHYQRLLNYVVPDVVHIMMGGKIVKTGGPELAQELEKTGY
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCC
ADLSGAVEGSDND
CCCCCCCCCCCCC
>Mature Secondary Structure 
STLLIKDLKVVAGEEPILNGVNLEIKAGEVHALMGPNGTGKSTLSETIMGNPLYQIVEG
CCEEHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCC
QIFLDGQDITTMSVDERARAGMFLAMQYPTEVVGISNADFIHAALNARNGNQPVAILPFL
EEEECCCCCEEEEHHHHHHCCEEEEEECCCEEEECCCCCCEEEEECCCCCCCCEEEHHHH
NELKQQMDFLEIDEDYADRGLNADFSGGEKKRNEILQMMMLKPSFAILDEIDSGLDIDAL
HHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHH
QIVAKGINAMRSDEFSCLMVTHYQRLLNYVVPDVVHIMMGGKIVKTGGPELAQELEKTGY
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCCC
ADLSGAVEGSDND
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]