| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yqgH [H]
Identifier: 116492237
GI number: 116492237
Start: 485105
End: 486013
Strand: Direct
Name: yqgH [H]
Synonym: PEPE_0434
Alternate gene names: 116492237
Gene position: 485105-486013 (Clockwise)
Preceding gene: 116492236
Following gene: 116492238
Centisome position: 26.47
GC content: 40.7
Gene sequence:
>909_bases ATGGATGCAGTAAAAAAAGAATTAACGCGTAAATCAAAGGCTTCCAGGCAGGACCAGCGTGGAAAGTTAATTTCCTTAGC TTGTGTAACTTTGATTATGTTGGTAGTCCTTTCAATTTTATACATGATTACTTCTAAAGGTTTAGCAACTTTCTTCGAAA ATAAAATGAGTATTGTTGATTTCTTTACTAAGCAAGTTTGGAATCCGAGTGCTAAACCTCAAGCGTTAGTGGGCGCACTA CCGATGATTGTAGGATCATTCAGTGTTACCGTTCTTTCAGCCCTTTTGGCAGCGCCATTTGCGATTGCCACCGCCATCTT CATGGTTGATATTGCAGGAAAACGTGGACGTAAAATTTTACAACCGGTCATCGAATTGTTGGTGGGAATTCCATCAGTAG TTTACGGATTTATCGGGTTGACGGTCGTCGTGCCCTTTACTCGAACAGTATTTGGTGGAACTGGTTTTGGAATTTTGTCG GGAACCTTCGTACTGTTTGTCATGGTCTTACCGACCGTAACTTCCATGTACGTTGATAGTTTAAAAGCTGTTCCACAGTT TTATCGCGAGGCTTCATTGGCTTTGGGAGCCACACGGTGGCAAACAATCTACAAAGTTATCATTCGAGCTTCCATTCCAG GCTTACTAACTGCTATTATTTTTGGAATGGCTAGAGCCTTTGGTGAAGCCTTAGCTGTTCAAATGGTAATTGGTAATGCA TCGATTTTACCAAGTGACTTAGTATCACCAGCCTCAACGTTAACTAGTGTGTTAACAACGGGAATTGGAAATACAGTTTT AGGGACCTTACCTAATAATGCCTTATGGTCATTAGCATTGGTGCTCTTACTAATGTCCTTGGTATTTAACCTCCTAACAA GGTTTATTGGAAAGAAGGGAGCATTTTAA
Upstream 100 bases:
>100_bases AGAATTTAGTTTCAGACTTAGGTTATATTTCAATCCATGATATGAAGGTAGAACTAACAAGTGATGACCAAGTAATCCCA ATTAAAGGAGCTGAGGAATA
Downstream 100 bases:
>100_bases ATGAACGCTAAGAGAGTTGATAAGATTGCTACAGCCGTTATTTATCTATTAGTTGGAATCGTTATTTTAATTTTAGTGGC TCTACTAGGTTTTATCTTGA
Product: ABC-type phosphate transport system, permease component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MDAVKKELTRKSKASRQDQRGKLISLACVTLIMLVVLSILYMITSKGLATFFENKMSIVDFFTKQVWNPSAKPQALVGAL PMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKILQPVIELLVGIPSVVYGFIGLTVVVPFTRTVFGGTGFGILS GTFVLFVMVLPTVTSMYVDSLKAVPQFYREASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNA SILPSDLVSPASTLTSVLTTGIGNTVLGTLPNNALWSLALVLLLMSLVFNLLTRFIGKKGAF
Sequences:
>Translated_302_residues MDAVKKELTRKSKASRQDQRGKLISLACVTLIMLVVLSILYMITSKGLATFFENKMSIVDFFTKQVWNPSAKPQALVGAL PMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKILQPVIELLVGIPSVVYGFIGLTVVVPFTRTVFGGTGFGILS GTFVLFVMVLPTVTSMYVDSLKAVPQFYREASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNA SILPSDLVSPASTLTSVLTTGIGNTVLGTLPNNALWSLALVLLLMSLVFNLLTRFIGKKGAF >Mature_302_residues MDAVKKELTRKSKASRQDQRGKLISLACVTLIMLVVLSILYMITSKGLATFFENKMSIVDFFTKQVWNPSAKPQALVGAL PMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKILQPVIELLVGIPSVVYGFIGLTVVVPFTRTVFGGTGFGILS GTFVLFVMVLPTVTSMYVDSLKAVPQFYREASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNA SILPSDLVSPASTLTSVLTTGIGNTVLGTLPNNALWSLALVLLLMSLVFNLLTRFIGKKGAF
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=309, Percent_Identity=26.8608414239482, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790163, Length=251, Percent_Identity=24.3027888446215, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32285; Mature: 32285
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVKKELTRKSKASRQDQRGKLISLACVTLIMLVVLSILYMITSKGLATFFENKMSIVD CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTKQVWNPSAKPQALVGALPMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKIL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH QPVIELLVGIPSVVYGFIGLTVVVPFTRTVFGGTGFGILSGTFVLFVMVLPTVTSMYVDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKAVPQFYREASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SILPSDLVSPASTLTSVLTTGIGNTVLGTLPNNALWSLALVLLLMSLVFNLLTRFIGKKG CCCCHHHCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AF CC >Mature Secondary Structure MDAVKKELTRKSKASRQDQRGKLISLACVTLIMLVVLSILYMITSKGLATFFENKMSIVD CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTKQVWNPSAKPQALVGALPMIVGSFSVTVLSALLAAPFAIATAIFMVDIAGKRGRKIL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH QPVIELLVGIPSVVYGFIGLTVVVPFTRTVFGGTGFGILSGTFVLFVMVLPTVTSMYVDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKAVPQFYREASLALGATRWQTIYKVIIRASIPGLLTAIIFGMARAFGEALAVQMVIGNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SILPSDLVSPASTLTSVLTTGIGNTVLGTLPNNALWSLALVLLLMSLVFNLLTRFIGKKG CCCCHHHCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]