Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is trxB [C]

Identifier: 116492169

GI number: 116492169

Start: 412199

End: 413185

Strand: Direct

Name: trxB [C]

Synonym: PEPE_0366

Alternate gene names: 116492169

Gene position: 412199-413185 (Clockwise)

Preceding gene: 116492166

Following gene: 116492171

Centisome position: 22.5

GC content: 39.92

Gene sequence:

>987_bases
ATGACGGAAATGTATGATATTACGATTATTGGTGGGGGTCCAGCCGGTTTATTTGCTGGATTTTATGCTGGAATGCGCAC
TGCCAAAACACAAATTATTGAAAGCCTTCCACAAGCTGGTGGACAAGTTGCTGCACTTTATCCAGAAAAAATGATTTACG
ATGTCGGTGGTTATGCTGGAATAAAAGCAGCTAATTTGGCTAAAGAACTTGAAAAACAAACGCGCTTGGTCGGAACTGAA
ATTCGTCTTAACGAAACCGTTGTTGATATTCAAGCTCAAGCTGATTTTTACCATGTTAAAACTAATCGGAATGAATACGA
TACCCGAGCAATTCTTTTAGCAACTGGTAATGGAGCATTTAATCCGCGAAAGTTAGCTGTGGAAGGGTTGGACCATTTAG
AAGATAAAAAAATCTACTATCATATGCCCGATGTTGAACATTTTGAAAATCAGGATATTTTAGTGGCAGGTGGCGGTGAC
TCGGCCATTGATATTGCGCTCATGCTGGAACCAATTGCTAAAAGTATCAGTTTGGTGCATCGTCGGCAGCAATTTAGGGG
GATGGAACGGAATGTACAACACCTCCAAGAATCGACGGTTAAAGTGATGACACCGTATTTAATTAATGGTGTTCGCGAGG
CTGTCGAAGGAATCGATGTCGATTTGAAAGAAATTGGTACCGAAGCCTTAAAAGCTACCCATTTTGATAAACTAATTGTT
AACTACGGATTTACCTCTAGTAATAAAATTATCAAAGGATGGGAAATCGATTTGACCCAAGAACATCGTATGTTTGCCGT
CGATAGCCTGATGCATACAAATATGAAAAATATTTATGCGATTGGTGATGGGGTAGAGTATCCTGGAAAGTTAAGACTAA
TTGCAACCGCCTTTGGTGAAGGCCCGATTGCGGTAAATCAAATTATGAACGACTTATATCCAGGCAAACGTGGACCTGTT
CATAGTACATCCATGTTTGAAAAATAA

Upstream 100 bases:

>100_bases
GCTTAAAAGACAATCCCAAGCATTCTTTTTTATTGAAGAAGCTGGTAATATATTTGGTGGATTATAAAAATGAAATTGAT
TTAATAAGGGAGCACAGGCA

Downstream 100 bases:

>100_bases
TCTGAATATATAAAAATGCAGTGAACTTAAAAACTAAGTTCACTGCATTTTTGTTAACTGCCGTTGGCATCTGGATTTGT
AATTTTAATTCGGTTTTCAC

Product: thioredoxin reductase

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTEMYDITIIGGGPAGLFAGFYAGMRTAKTQIIESLPQAGGQVAALYPEKMIYDVGGYAGIKAANLAKELEKQTRLVGTE
IRLNETVVDIQAQADFYHVKTNRNEYDTRAILLATGNGAFNPRKLAVEGLDHLEDKKIYYHMPDVEHFENQDILVAGGGD
SAIDIALMLEPIAKSISLVHRRQQFRGMERNVQHLQESTVKVMTPYLINGVREAVEGIDVDLKEIGTEALKATHFDKLIV
NYGFTSSNKIIKGWEIDLTQEHRMFAVDSLMHTNMKNIYAIGDGVEYPGKLRLIATAFGEGPIAVNQIMNDLYPGKRGPV
HSTSMFEK

Sequences:

>Translated_328_residues
MTEMYDITIIGGGPAGLFAGFYAGMRTAKTQIIESLPQAGGQVAALYPEKMIYDVGGYAGIKAANLAKELEKQTRLVGTE
IRLNETVVDIQAQADFYHVKTNRNEYDTRAILLATGNGAFNPRKLAVEGLDHLEDKKIYYHMPDVEHFENQDILVAGGGD
SAIDIALMLEPIAKSISLVHRRQQFRGMERNVQHLQESTVKVMTPYLINGVREAVEGIDVDLKEIGTEALKATHFDKLIV
NYGFTSSNKIIKGWEIDLTQEHRMFAVDSLMHTNMKNIYAIGDGVEYPGKLRLIATAFGEGPIAVNQIMNDLYPGKRGPV
HSTSMFEK
>Mature_327_residues
TEMYDITIIGGGPAGLFAGFYAGMRTAKTQIIESLPQAGGQVAALYPEKMIYDVGGYAGIKAANLAKELEKQTRLVGTEI
RLNETVVDIQAQADFYHVKTNRNEYDTRAILLATGNGAFNPRKLAVEGLDHLEDKKIYYHMPDVEHFENQDILVAGGGDS
AIDIALMLEPIAKSISLVHRRQQFRGMERNVQHLQESTVKVMTPYLINGVREAVEGIDVDLKEIGTEALKATHFDKLIVN
YGFTSSNKIIKGWEIDLTQEHRMFAVDSLMHTNMKNIYAIGDGVEYPGKLRLIATAFGEGPIAVNQIMNDLYPGKRGPVH
STSMFEK

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

None

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): FENR_PEDPA (Q03H60)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_803904.1
- ProteinModelPortal:   Q03H60
- SMR:   Q03H60
- STRING:   Q03H60
- GeneID:   4418437
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0366
- NMPDR:   fig|278197.10.peg.339
- eggNOG:   COG0492
- HOGENOM:   HBG669726
- OMA:   FQVFELG
- BioCyc:   PPEN278197:PEPE_0366-MONOMER
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 36365; Mature: 36234

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: BINDING 34-34 BINDING 42-42 BINDING 47-47 BINDING 87-87 BINDING 120-120 BINDING 283-283 BINDING 323-323

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMYDITIIGGGPAGLFAGFYAGMRTAKTQIIESLPQAGGQVAALYPEKMIYDVGGYAG
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHEEECCCCCC
IKAANLAKELEKQTRLVGTEIRLNETVVDIQAQADFYHVKTNRNEYDTRAILLATGNGAF
CHHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCC
NPRKLAVEGLDHLEDKKIYYHMPDVEHFENQDILVAGGGDSAIDIALMLEPIAKSISLVH
CCHHHHHHHHHCCCCCEEEEECCCHHHCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHH
RRQQFRGMERNVQHLQESTVKVMTPYLINGVREAVEGIDVDLKEIGTEALKATHFDKLIV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHEEE
NYGFTSSNKIIKGWEIDLTQEHRMFAVDSLMHTNMKNIYAIGDGVEYPGKLRLIATAFGE
ECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCC
GPIAVNQIMNDLYPGKRGPVHSTSMFEK
CCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEMYDITIIGGGPAGLFAGFYAGMRTAKTQIIESLPQAGGQVAALYPEKMIYDVGGYAG
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHEEECCCCCC
IKAANLAKELEKQTRLVGTEIRLNETVVDIQAQADFYHVKTNRNEYDTRAILLATGNGAF
CHHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCC
NPRKLAVEGLDHLEDKKIYYHMPDVEHFENQDILVAGGGDSAIDIALMLEPIAKSISLVH
CCHHHHHHHHHCCCCCEEEEECCCHHHCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHH
RRQQFRGMERNVQHLQESTVKVMTPYLINGVREAVEGIDVDLKEIGTEALKATHFDKLIV
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHEEE
NYGFTSSNKIIKGWEIDLTQEHRMFAVDSLMHTNMKNIYAIGDGVEYPGKLRLIATAFGE
ECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCC
GPIAVNQIMNDLYPGKRGPVHSTSMFEK
CCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA