| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492126
Identifier: 116492126
GI number: 116492126
Start: 371498
End: 373531
Strand: Direct
Name: 116492126
Synonym: PEPE_0323
Alternate gene names: NA
Gene position: 371498-373531 (Clockwise)
Preceding gene: 116492125
Following gene: 116492127
Centisome position: 20.27
GC content: 33.82
Gene sequence:
>2034_bases ATGTCATTAGTTGGCGTGGGCCAAGTACATGCTGAAGACCTAACTTATACTCAAAATTTTCAAAATGATACAACAACTTT ATCTGGTAAATCAACAGCAACGAGCATGTACTTTACCAAGATGGATTATTGGAACGTTAAAAAAGCTACCTTTAATTTTA ATTATCAAGTTTCACAGTTAGCTGATAAAACAACGTCTGATATCACGTTATCAATGAACGGCGTTAAATTTTATTCATTT CGTCCAGAGCATAAGAGTGGTTTTCAGAGTAAAGCTGTTGAGATTCCGCTAGAACTCCTGCAAGGTACTAATAAACTTGA AATTAAAGGACAAATTTTAAATAAAAAAGATGCTAAGAATTATGATTTAGCACAAACTCCAGCTAATTGGCTAACAATTA AGTCTGGTACTAATATGAATTTTAAATATGAAGTAAAAGATCCAGAAAACACATTGCGTTCATTTTATGATCATTTTTCT GGTGAAGATACAATAGCTAATCAGCACTCAAAAATTGTCACCCCTGATCAACCAATTAAAGCTGAATTAGCGGCTGGTAT GACTGCTCTAACAGGTATCTCGCACGCAACTACTACAAACAATAACCAAATCAGTGTTGTCCAAAATACAAATATGGATG CTACTAAAGGTGATTATATCTTGTATGTCGCTAAATATGATAATCTTCCTAAAGCTTTGAAGCAGGAAATTAGCGAAAAA GACGTTGAGAAAAGAGCGGTAATTAAAACTCACTATACTAAAAAAGGTGATTATTTAATTGTAACGGCCAAAACAGATGG CTTATTAAAAAAGGCTTCCCAGTTTTTTGCTAATCCAGAACTAATGCAACAGACGAATAAGAGTACAGAAATGATTTCGT ATTTAACAAATACCTTTATGTCTAAAGTTCAAGATAGAGGTAAGTATCAACTAACCAATGTCATTGATAAGATTAAAGGT GCTAGTCATCATGAAACCAATTATTTGGTAACATTGCCTAATGACCGAACAAACGCTGATGGTTCCGAAGTGAAATTACA TTTTCGATATAGCAAAAACCTTAACTTCAAACGTTCCTTAGTGACGGTGTACGTTAACGATACAACCTTAGGAAGTAAAA AATTAACCGCTGCTAAAGCTAATGGAGACGAAGTTACTTTGGAGGTTCCTAAAGGGACTTCCTTAGGAAACAGCTTTGAA GTCCGAGTAGCTTTTGATTTGGAAATGAAGGATCAAGAAATTTCAGATAACTCTGAAACCCCTTGGGCAGAAGTAGATAC GAATTCTGAAATGAAGGTTAAATCAGAAAAGAGTAACGATTTACTCTTTACCAACTATCCCACAATCTTTATGAAGAACC AAACATATAACAACTTAGCAGTGGTTATACCTAAAAAATTAACTGCGATAGACTTCAAGAGTTTAACAAATATTTTTAAC TTGATGGGTGCTTACGCTAAGAGTAATACTGGAAAAATTAAATTTTATACTGAACAGCCTAATCAGGATACAATGATTAA TGATAATTTAATTGTACTTGGGACCCCTTCTAATAATGCAATGATTAAATCCTTGAATAAAGATTTGTATTTCAAATATT CTGATGACTATCGAGGATTTGTTTCTAATGAAAAGCTCAGTATTGAGGAAGATTATGGCAAGACGATTGGAACAGCGCAA CTAATTCGTTCTCCTGAAAATAGTAAAAAGGGCATTCTAGTCCTAACGGGGGCTACTCCGGAAGCCAGTTATCTAGCTTC GACACAGCTTAATTTTAAAAAGAATATCGATCAATTTACAGGCGACGCAATTGTGGTAGATCAAAATAACAACCACTATA GCTATCGCTTCAAGAAAAACAAGTATATTGATCGAAATTTAGAACACAAGCGGACCATTAGTAATAATAGTCAATTAATT ATTTATTTGGGAATTGTCTTTTTAGCTTTGATTGTCATTGGTTTTGGAGTTTACCTAGTTTTTAGAAAGCAAGCCATGAT GAATGGAGGTCGTAAGAATGCAAAACAAAAATAG
Upstream 100 bases:
>100_bases GTGGGGTATATTCGTGAACAAGTCTTTCATAAACAAGCAAAATGGTATAAAACTAAGCGGTATAAGTAAATTAATTATTT TAACATTAACGATATTATTA
Downstream 100 bases:
>100_bases CAAAGATCGTTTGTATGAAGATATTGGTCTACTCCTACTTTTATTAATGCTTAGCATTACGGCCGTTTTGATGATGCTTT CTCAAAACATCGTTGTGAAT
Product: glycosyl transferase
Products: NA
Alternate protein names: Cellulose Synthase; Cellulose Synthase Catalytic Subunit; Cellulose Synthase Subunit B; Secreted Protein; Glycosyl Transferase; Cellulose Synthase Domain Protein
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MSLVGVGQVHAEDLTYTQNFQNDTTTLSGKSTATSMYFTKMDYWNVKKATFNFNYQVSQLADKTTSDITLSMNGVKFYSF RPEHKSGFQSKAVEIPLELLQGTNKLEIKGQILNKKDAKNYDLAQTPANWLTIKSGTNMNFKYEVKDPENTLRSFYDHFS GEDTIANQHSKIVTPDQPIKAELAAGMTALTGISHATTTNNNQISVVQNTNMDATKGDYILYVAKYDNLPKALKQEISEK DVEKRAVIKTHYTKKGDYLIVTAKTDGLLKKASQFFANPELMQQTNKSTEMISYLTNTFMSKVQDRGKYQLTNVIDKIKG ASHHETNYLVTLPNDRTNADGSEVKLHFRYSKNLNFKRSLVTVYVNDTTLGSKKLTAAKANGDEVTLEVPKGTSLGNSFE VRVAFDLEMKDQEISDNSETPWAEVDTNSEMKVKSEKSNDLLFTNYPTIFMKNQTYNNLAVVIPKKLTAIDFKSLTNIFN LMGAYAKSNTGKIKFYTEQPNQDTMINDNLIVLGTPSNNAMIKSLNKDLYFKYSDDYRGFVSNEKLSIEEDYGKTIGTAQ LIRSPENSKKGILVLTGATPEASYLASTQLNFKKNIDQFTGDAIVVDQNNNHYSYRFKKNKYIDRNLEHKRTISNNSQLI IYLGIVFLALIVIGFGVYLVFRKQAMMNGGRKNAKQK
Sequences:
>Translated_677_residues MSLVGVGQVHAEDLTYTQNFQNDTTTLSGKSTATSMYFTKMDYWNVKKATFNFNYQVSQLADKTTSDITLSMNGVKFYSF RPEHKSGFQSKAVEIPLELLQGTNKLEIKGQILNKKDAKNYDLAQTPANWLTIKSGTNMNFKYEVKDPENTLRSFYDHFS GEDTIANQHSKIVTPDQPIKAELAAGMTALTGISHATTTNNNQISVVQNTNMDATKGDYILYVAKYDNLPKALKQEISEK DVEKRAVIKTHYTKKGDYLIVTAKTDGLLKKASQFFANPELMQQTNKSTEMISYLTNTFMSKVQDRGKYQLTNVIDKIKG ASHHETNYLVTLPNDRTNADGSEVKLHFRYSKNLNFKRSLVTVYVNDTTLGSKKLTAAKANGDEVTLEVPKGTSLGNSFE VRVAFDLEMKDQEISDNSETPWAEVDTNSEMKVKSEKSNDLLFTNYPTIFMKNQTYNNLAVVIPKKLTAIDFKSLTNIFN LMGAYAKSNTGKIKFYTEQPNQDTMINDNLIVLGTPSNNAMIKSLNKDLYFKYSDDYRGFVSNEKLSIEEDYGKTIGTAQ LIRSPENSKKGILVLTGATPEASYLASTQLNFKKNIDQFTGDAIVVDQNNNHYSYRFKKNKYIDRNLEHKRTISNNSQLI IYLGIVFLALIVIGFGVYLVFRKQAMMNGGRKNAKQK >Mature_676_residues SLVGVGQVHAEDLTYTQNFQNDTTTLSGKSTATSMYFTKMDYWNVKKATFNFNYQVSQLADKTTSDITLSMNGVKFYSFR PEHKSGFQSKAVEIPLELLQGTNKLEIKGQILNKKDAKNYDLAQTPANWLTIKSGTNMNFKYEVKDPENTLRSFYDHFSG EDTIANQHSKIVTPDQPIKAELAAGMTALTGISHATTTNNNQISVVQNTNMDATKGDYILYVAKYDNLPKALKQEISEKD VEKRAVIKTHYTKKGDYLIVTAKTDGLLKKASQFFANPELMQQTNKSTEMISYLTNTFMSKVQDRGKYQLTNVIDKIKGA SHHETNYLVTLPNDRTNADGSEVKLHFRYSKNLNFKRSLVTVYVNDTTLGSKKLTAAKANGDEVTLEVPKGTSLGNSFEV RVAFDLEMKDQEISDNSETPWAEVDTNSEMKVKSEKSNDLLFTNYPTIFMKNQTYNNLAVVIPKKLTAIDFKSLTNIFNL MGAYAKSNTGKIKFYTEQPNQDTMINDNLIVLGTPSNNAMIKSLNKDLYFKYSDDYRGFVSNEKLSIEEDYGKTIGTAQL IRSPENSKKGILVLTGATPEASYLASTQLNFKKNIDQFTGDAIVVDQNNNHYSYRFKKNKYIDRNLEHKRTISNNSQLII YLGIVFLALIVIGFGVYLVFRKQAMMNGGRKNAKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76363; Mature: 76232
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVGVGQVHAEDLTYTQNFQNDTTTLSGKSTATSMYFTKMDYWNVKKATFNFNYQVSQL CCEEECCCEECCCCEEECCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEECEEHHHH ADKTTSDITLSMNGVKFYSFRPEHKSGFQSKAVEIPLELLQGTNKLEIKGQILNKKDAKN HCCCCCCEEEEECCEEEEEECCHHHCCCCHHHHEEEHHHHCCCCEEEEEEEEECCCCCCC YDLAQTPANWLTIKSGTNMNFKYEVKDPENTLRSFYDHFSGEDTIANQHSKIVTPDQPIK CCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHH AELAAGMTALTGISHATTTNNNQISVVQNTNMDATKGDYILYVAKYDNLPKALKQEISEK HHHHCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH DVEKRAVIKTHYTKKGDYLIVTAKTDGLLKKASQFFANPELMQQTNKSTEMISYLTNTFM HHHHHHEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHH SKVQDRGKYQLTNVIDKIKGASHHETNYLVTLPNDRTNADGSEVKLHFRYSKNLNFKRSL HHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEE VTVYVNDTTLGSKKLTAAKANGDEVTLEVPKGTSLGNSFEVRVAFDLEMKDQEISDNSET EEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC PWAEVDTNSEMKVKSEKSNDLLFTNYPTIFMKNQTYNNLAVVIPKKLTAIDFKSLTNIFN CCEEECCCCCEEEECCCCCCEEEECCCEEEEECCCCCCEEEEECCCEEEECHHHHHHHHH LMGAYAKSNTGKIKFYTEQPNQDTMINDNLIVLGTPSNNAMIKSLNKDLYFKYSDDYRGF HHHHHHCCCCCEEEEEECCCCCCCEECCCEEEEECCCCCHHHEECCCCEEEEECCCCCCC VSNEKLSIEEDYGKTIGTAQLIRSPENSKKGILVLTGATPEASYLASTQLNFKKNIDQFT CCCCCEEEEHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHCHHHHC GDAIVVDQNNNHYSYRFKKNKYIDRNLEHKRTISNNSQLIIYLGIVFLALIVIGFGVYLV CCEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH FRKQAMMNGGRKNAKQK HHHHHHHCCCCCCCCCC >Mature Secondary Structure SLVGVGQVHAEDLTYTQNFQNDTTTLSGKSTATSMYFTKMDYWNVKKATFNFNYQVSQL CEEECCCEECCCCEEECCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEEECEEHHHH ADKTTSDITLSMNGVKFYSFRPEHKSGFQSKAVEIPLELLQGTNKLEIKGQILNKKDAKN HCCCCCCEEEEECCEEEEEECCHHHCCCCHHHHEEEHHHHCCCCEEEEEEEEECCCCCCC YDLAQTPANWLTIKSGTNMNFKYEVKDPENTLRSFYDHFSGEDTIANQHSKIVTPDQPIK CCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHH AELAAGMTALTGISHATTTNNNQISVVQNTNMDATKGDYILYVAKYDNLPKALKQEISEK HHHHCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH DVEKRAVIKTHYTKKGDYLIVTAKTDGLLKKASQFFANPELMQQTNKSTEMISYLTNTFM HHHHHHEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHH SKVQDRGKYQLTNVIDKIKGASHHETNYLVTLPNDRTNADGSEVKLHFRYSKNLNFKRSL HHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEE VTVYVNDTTLGSKKLTAAKANGDEVTLEVPKGTSLGNSFEVRVAFDLEMKDQEISDNSET EEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC PWAEVDTNSEMKVKSEKSNDLLFTNYPTIFMKNQTYNNLAVVIPKKLTAIDFKSLTNIFN CCEEECCCCCEEEECCCCCCEEEECCCEEEEECCCCCCEEEEECCCEEEECHHHHHHHHH LMGAYAKSNTGKIKFYTEQPNQDTMINDNLIVLGTPSNNAMIKSLNKDLYFKYSDDYRGF HHHHHHCCCCCEEEEEECCCCCCCEECCCEEEEECCCCCHHHEECCCCEEEEECCCCCCC VSNEKLSIEEDYGKTIGTAQLIRSPENSKKGILVLTGATPEASYLASTQLNFKKNIDQFT CCCCCEEEEHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHCHHHHC GDAIVVDQNNNHYSYRFKKNKYIDRNLEHKRTISNNSQLIIYLGIVFLALIVIGFGVYLV CCEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH FRKQAMMNGGRKNAKQK HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA