Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492122

Identifier: 116492122

GI number: 116492122

Start: 366029

End: 367156

Strand: Direct

Name: 116492122

Synonym: PEPE_0319

Alternate gene names: NA

Gene position: 366029-367156 (Clockwise)

Preceding gene: 116492121

Following gene: 116492123

Centisome position: 19.98

GC content: 34.22

Gene sequence:

>1128_bases
TTGAGAAGAAAAATCATTTCTTTAGGAATGTTGATTGGATGCATCTTAATCTTAGTTGGTTGTGGACAAAAACAACCACA
AACTAAGATTCCTAAAGCAGACGCCGATTATTTAACCATTACAACGCAGTATCATAAAAACAAACAAAACATCGAATTGT
TACATAATTTTTTAAAAGATTCAATGGTTCAAAAAGCTGGTATCTACACGAATTTTAATAATAATCAAAAAAAATCCGAT
AATGCCACGGGACATGATATGTTATCTGAATCATCAGGTTTATGGTTAGAATACTTGGCGCAAACTCATCAAAATAAGGC
TTTTCGGGAGTTCTACAAAAATACCAAGAAATATTTTGATCAAGGTCGGCAATTTAGTTATCGCATCGATGGTAAGACTA
AGAAAAAGTCCGATGTGAATGCTACGCTGGATGATTTAAGAATTATTCGTGCTTTACAAATTTATGCGCAAAATAATAAT
AGTAAAAAATATCGACACGAAGCGGCTGAACGGTTTGCTATGCTACAAACGACAAGCATTCAAAAAGCACGGGTACTTAA
TTTTTATGATGTACGTACTAAAAAAGCTAGTAACGAAAGTTCTTTAGCCTACTATGATTTGGCTACCCTAAAGTACTTTG
AATCTGTATCTAAAAAAGAGCGGGGATATTATCGAGAACAATTAAAGCTAGTTGAAAAAGGATATCTGGGAGATATTTTT
CCTTTGTACGCTCCGAGCTACAACTGGAAAACAAACCAATATGGCACGAAAAATCTGAATACTTCAGAAGCTTTGATTAC
AGTCCTGCATTTGGCTGAAATTGGTAAGATGAAACCTGAAACAGTCAGCTGGTTAAAAATGCAAATTGATAATAAGAAGT
TATATAACAGTTACACTACTGCTGGAGCAATCGAGGACCATGACCAATCAACAGGTAATTATGCTATAGCAGCAATGATT
TTCGCCAGAAATGGTGATCGTAAATATTATCAAAAGGCCATGAACTTGGTTTGGGATGATCAGGTTCGAAATAAGAATTC
AAAAATTTATGGGGCATTAGGTGATACAAAAGATAATGACGCTTACTCATTTAATAACCTATTGGCATTGTTAACATCGC
AATACTAA

Upstream 100 bases:

>100_bases
GTCTTGCCTTTTTTAGACAATCAATATAAATATGCTTTTTTTATAATTATTATTAGTACAATAATTTTTGAAGAGTAAAA
CTTTTGTAAAGGAGAAAACT

Downstream 100 bases:

>100_bases
AGGATGGGATGAAATGGTTTCGATTAAAAACAGTTGGAGGGTATTTCAAAAACATATATCACCTGCTGCCGTTGCAACGG
CTTTGGCAGCGATTATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRRKIISLGMLIGCILILVGCGQKQPQTKIPKADADYLTITTQYHKNKQNIELLHNFLKDSMVQKAGIYTNFNNNQKKSD
NATGHDMLSESSGLWLEYLAQTHQNKAFREFYKNTKKYFDQGRQFSYRIDGKTKKKSDVNATLDDLRIIRALQIYAQNNN
SKKYRHEAAERFAMLQTTSIQKARVLNFYDVRTKKASNESSLAYYDLATLKYFESVSKKERGYYREQLKLVEKGYLGDIF
PLYAPSYNWKTNQYGTKNLNTSEALITVLHLAEIGKMKPETVSWLKMQIDNKKLYNSYTTAGAIEDHDQSTGNYAIAAMI
FARNGDRKYYQKAMNLVWDDQVRNKNSKIYGALGDTKDNDAYSFNNLLALLTSQY

Sequences:

>Translated_375_residues
MRRKIISLGMLIGCILILVGCGQKQPQTKIPKADADYLTITTQYHKNKQNIELLHNFLKDSMVQKAGIYTNFNNNQKKSD
NATGHDMLSESSGLWLEYLAQTHQNKAFREFYKNTKKYFDQGRQFSYRIDGKTKKKSDVNATLDDLRIIRALQIYAQNNN
SKKYRHEAAERFAMLQTTSIQKARVLNFYDVRTKKASNESSLAYYDLATLKYFESVSKKERGYYREQLKLVEKGYLGDIF
PLYAPSYNWKTNQYGTKNLNTSEALITVLHLAEIGKMKPETVSWLKMQIDNKKLYNSYTTAGAIEDHDQSTGNYAIAAMI
FARNGDRKYYQKAMNLVWDDQVRNKNSKIYGALGDTKDNDAYSFNNLLALLTSQY
>Mature_375_residues
MRRKIISLGMLIGCILILVGCGQKQPQTKIPKADADYLTITTQYHKNKQNIELLHNFLKDSMVQKAGIYTNFNNNQKKSD
NATGHDMLSESSGLWLEYLAQTHQNKAFREFYKNTKKYFDQGRQFSYRIDGKTKKKSDVNATLDDLRIIRALQIYAQNNN
SKKYRHEAAERFAMLQTTSIQKARVLNFYDVRTKKASNESSLAYYDLATLKYFESVSKKERGYYREQLKLVEKGYLGDIF
PLYAPSYNWKTNQYGTKNLNTSEALITVLHLAEIGKMKPETVSWLKMQIDNKKLYNSYTTAGAIEDHDQSTGNYAIAAMI
FARNGDRKYYQKAMNLVWDDQVRNKNSKIYGALGDTKDNDAYSFNNLLALLTSQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43333; Mature: 43333

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKIISLGMLIGCILILVGCGQKQPQTKIPKADADYLTITTQYHKNKQNIELLHNFLKD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHH
SMVQKAGIYTNFNNNQKKSDNATGHDMLSESSGLWLEYLAQTHQNKAFREFYKNTKKYFD
HHHHHHCCEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGRQFSYRIDGKTKKKSDVNATLDDLRIIRALQIYAQNNNSKKYRHEAAERFAMLQTTSI
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
QKARVLNFYDVRTKKASNESSLAYYDLATLKYFESVSKKERGYYREQLKLVEKGYLGDIF
CHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PLYAPSYNWKTNQYGTKNLNTSEALITVLHLAEIGKMKPETVSWLKMQIDNKKLYNSYTT
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCHHHHHCCCC
AGAIEDHDQSTGNYAIAAMIFARNGDRKYYQKAMNLVWDDQVRNKNSKIYGALGDTKDND
CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCC
AYSFNNLLALLTSQY
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRKIISLGMLIGCILILVGCGQKQPQTKIPKADADYLTITTQYHKNKQNIELLHNFLKD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHH
SMVQKAGIYTNFNNNQKKSDNATGHDMLSESSGLWLEYLAQTHQNKAFREFYKNTKKYFD
HHHHHHCCEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGRQFSYRIDGKTKKKSDVNATLDDLRIIRALQIYAQNNNSKKYRHEAAERFAMLQTTSI
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
QKARVLNFYDVRTKKASNESSLAYYDLATLKYFESVSKKERGYYREQLKLVEKGYLGDIF
CHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PLYAPSYNWKTNQYGTKNLNTSEALITVLHLAEIGKMKPETVSWLKMQIDNKKLYNSYTT
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCHHHHHCCCC
AGAIEDHDQSTGNYAIAAMIFARNGDRKYYQKAMNLVWDDQVRNKNSKIYGALGDTKDND
CCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCCC
AYSFNNLLALLTSQY
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA