| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is veg [H]
Identifier: 116492074
GI number: 116492074
Start: 317061
End: 317363
Strand: Direct
Name: veg [H]
Synonym: PEPE_0270
Alternate gene names: 116492074
Gene position: 317061-317363 (Clockwise)
Preceding gene: 116492073
Following gene: 116492075
Centisome position: 17.3
GC content: 41.58
Gene sequence:
>303_bases ATGCCAAACACACTAGCTACAATTAAGGATAAACTCGATGGTCGCATCGGGGAAGAATTACTGGTGGTTGCTCAAATCGG ACGTAAAAAGATTACTAAGCGTCGTGGCCGCCTGCATATGACATATCCAGCCGTTTTCGTAGTAGATTTGGATCAAGACG AGAACTCCTTCGAACGTGTGTCATACAGTTACACGGATATTTTGACAAGAAACATCGAAGTTAACTTTGATGATGAAATC GACCAAGCTGAGCTGTCAATTGAGCTTGATGATGATGACGTTGAAGAATTTGATGAAGACTAA
Upstream 100 bases:
>100_bases AAAAATGAAATGTAAAGCGTTGATATTAAATTGTACGTGTGGTAAAATTGCAAACTTTGTGAAACTATGATAGAATGTTT CACATGGGAAGGTGAAGTTA
Downstream 100 bases:
>100_bases TATCTAATTAAATTGGCGATAGTTGGGGCATTTAAGCTTTTATGACTATTAGCCTTTTTTATTTTTACCATTTTTTAGTA TAATTTAGGTTAAAAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPNTLATIKDKLDGRIGEELLVVAQIGRKKITKRRGRLHMTYPAVFVVDLDQDENSFERVSYSYTDILTRNIEVNFDDEI DQAELSIELDDDDVEEFDED
Sequences:
>Translated_100_residues MPNTLATIKDKLDGRIGEELLVVAQIGRKKITKRRGRLHMTYPAVFVVDLDQDENSFERVSYSYTDILTRNIEVNFDDEI DQAELSIELDDDDVEEFDED >Mature_99_residues PNTLATIKDKLDGRIGEELLVVAQIGRKKITKRRGRLHMTYPAVFVVDLDQDENSFERVSYSYTDILTRNIEVNFDDEID QAELSIELDDDDVEEFDED
Specific function: Unknown
COG id: COG4466
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009366 [H]
Pfam domain/function: PF06257 DUF1021 [H]
EC number: NA
Molecular weight: Translated: 11596; Mature: 11465
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTLATIKDKLDGRIGEELLVVAQIGRKKITKRRGRLHMTYPAVFVVDLDQDENSFERV CCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHCCCEEEECCEEEEEECCCCCCCHHHE SYSYTDILTRNIEVNFDDEIDQAELSIELDDDDVEEFDED ECCHHHEEEECEEECCCCCCCCEEEEEEECCCCHHHCCCC >Mature Secondary Structure PNTLATIKDKLDGRIGEELLVVAQIGRKKITKRRGRLHMTYPAVFVVDLDQDENSFERV CCCHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHCCCEEEECCEEEEEECCCCCCCHHHE SYSYTDILTRNIEVNFDDEIDQAELSIELDDDDVEEFDED ECCHHHEEEECEEECCCCCCCCEEEEEEECCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 6181373 [H]