| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492068
Identifier: 116492068
GI number: 116492068
Start: 310941
End: 311606
Strand: Direct
Name: 116492068
Synonym: PEPE_0264
Alternate gene names: NA
Gene position: 310941-311606 (Clockwise)
Preceding gene: 116492067
Following gene: 116492069
Centisome position: 16.97
GC content: 33.78
Gene sequence:
>666_bases ATGAATGAAAAAGGATGGAATCGAACAGCTAATATTGCTGGAATTCTCTCATTAGTTTCAATTGGGTTATTCTTATTTAA ATTATTAACAGGTAGCATTAATTTTTGGACAATTTTATTTTTCTCGTTAATTGTGGCAGGAGCGGTTTCCTACGCACTAA TCCATATGCTATTAAATGTTCGTAAATTAACGCCTGCTGAAGAATCGGTAGTCAATCAAGTTTCTGATACAAAAGAATTT GTGGGCTTCTTTTTTAGTACTTTGATAATGCTAGCATCAGGTATTGGATTTGAATTTTTTAGTGGAAAACCTTCTGGAAA GGTAGCAGGGACTTTCTTGTTCGTCTATACGGTTACTGCCGCCTTAGTTAAGGTTTATGATATCTATCGTTTGACCATTG CAAAGCAAAAGCATGTCCAATTGGTTAATACTTTTGCATATCGGCGTCTATCCCAGGCTGAAAAAATTGGATTGGTGATA TTTTTAATTGGATTACTTGGAATGTTACTAGTACCACCCATGATCTTATTATGTTACTTAGGCTTGATGGTTTTCTTAAT CCGTTTAGTATCTAATCGAGTGGAAGGCCGCATCATTGATTTGTTTTTAATGCGTGTTAACATTGCTATGATTATTATTT CAGCAATATTAGTGTTTTTTAAATAA
Upstream 100 bases:
>100_bases GGATTAAAGGGAATTATGACGAATCAATCTAGATAGGAGAGCTATTAAATGGTAGAATTGAAATTACTTATGTACTTATA CTATGGAGATTTTAAATACT
Downstream 100 bases:
>100_bases AAATAAATTAGACTGGAATCAAATCAGATGATTTGAATTTCAGTTTTTTTAATTAATGGGGGGATTTTATGATTCAGATT GGACTAAGTACTTGGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNEKGWNRTANIAGILSLVSIGLFLFKLLTGSINFWTILFFSLIVAGAVSYALIHMLLNVRKLTPAEESVVNQVSDTKEF VGFFFSTLIMLASGIGFEFFSGKPSGKVAGTFLFVYTVTAALVKVYDIYRLTIAKQKHVQLVNTFAYRRLSQAEKIGLVI FLIGLLGMLLVPPMILLCYLGLMVFLIRLVSNRVEGRIIDLFLMRVNIAMIIISAILVFFK
Sequences:
>Translated_221_residues MNEKGWNRTANIAGILSLVSIGLFLFKLLTGSINFWTILFFSLIVAGAVSYALIHMLLNVRKLTPAEESVVNQVSDTKEF VGFFFSTLIMLASGIGFEFFSGKPSGKVAGTFLFVYTVTAALVKVYDIYRLTIAKQKHVQLVNTFAYRRLSQAEKIGLVI FLIGLLGMLLVPPMILLCYLGLMVFLIRLVSNRVEGRIIDLFLMRVNIAMIIISAILVFFK >Mature_221_residues MNEKGWNRTANIAGILSLVSIGLFLFKLLTGSINFWTILFFSLIVAGAVSYALIHMLLNVRKLTPAEESVVNQVSDTKEF VGFFFSTLIMLASGIGFEFFSGKPSGKVAGTFLFVYTVTAALVKVYDIYRLTIAKQKHVQLVNTFAYRRLSQAEKIGLVI FLIGLLGMLLVPPMILLCYLGLMVFLIRLVSNRVEGRIIDLFLMRVNIAMIIISAILVFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24674; Mature: 24674
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKGWNRTANIAGILSLVSIGLFLFKLLTGSINFWTILFFSLIVAGAVSYALIHMLLNV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RKLTPAEESVVNQVSDTKEFVGFFFSTLIMLASGIGFEFFSGKPSGKVAGTFLFVYTVTA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHH ALVKVYDIYRLTIAKQKHVQLVNTFAYRRLSQAEKIGLVIFLIGLLGMLLVPPMILLCYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMVFLIRLVSNRVEGRIIDLFLMRVNIAMIIISAILVFFK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEKGWNRTANIAGILSLVSIGLFLFKLLTGSINFWTILFFSLIVAGAVSYALIHMLLNV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RKLTPAEESVVNQVSDTKEFVGFFFSTLIMLASGIGFEFFSGKPSGKVAGTFLFVYTVTA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHH ALVKVYDIYRLTIAKQKHVQLVNTFAYRRLSQAEKIGLVIFLIGLLGMLLVPPMILLCYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMVFLIRLVSNRVEGRIIDLFLMRVNIAMIIISAILVFFK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA