Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492058

Identifier: 116492058

GI number: 116492058

Start: 301301

End: 302239

Strand: Direct

Name: 116492058

Synonym: PEPE_0254

Alternate gene names: NA

Gene position: 301301-302239 (Clockwise)

Preceding gene: 116492057

Following gene: 116492060

Centisome position: 16.44

GC content: 38.98

Gene sequence:

>939_bases
ATGGGACTATTGATGTTAGGATTGGTTGCGGGTGCGGTAGTACCCTTTCAAACGGCGGTTAATTCACGATTAAGAACGTA
TGTTATTTCACCATTCGTATCGTCTTTGATTTCTTTTATGGTGGGAACCATCTTTTTGATAGTAATCATTGTTTTAAGCG
GTGGACAGCTCTTATTAACTAATGCGCAATTACATGCCATTCCATGGTGGATGTATCTCGGTGGTGTTTTGGGGATGATT
GGATTAACAACTAATATTCTTTTATTCCCCATTTTAGGTAGTGTTCAAACGGTGATCATGCCCGTTTTAGGTCAAATTAT
GATGAGTATGATAATTGATAACTATGGCATGTTTGGCACCACACGCCATCCACTTTCGTTAATGCGAATGGTCGGAGTTC
TACTATTGATTGTGGGGGTATTAATTGTGGTCGCCTTACCAGAATATTTAGCACGGAATTCTATGAAAAGACCCCCTGAA
CAACGAGTTAAGTGGAAATGGTTATGGCAAATTTTCGGCGTGCTTGTGGGCGGAATGCTCGCAATTCAAGCAGCATTAAA
TGGACGATTAGGTGGGTTATTACAGGCCCCTATTCACGCTGCTTTAATATCATTTTTTATTGGAACAATAATGTTATTCC
TGGTAGCTGTATTCCAAGGAACTTTAAAAAATATCCGGCTAGTTGTTCAACAGAAAACACCTTGGTGGGTTTGGATTGGC
GGTTTTTTTGGAGCAGCTTATATCTTTTTAAATGCATATTTGGTACCACAGATTGGAACTGGAACGGTAGTAGTGCTAGT
TTTACTGGGACAAATTATCAGTAGTTTAAATATTGATCAGTTTGGCTTATTAGGATCGATGAAATCGAGCATCTCAGTTG
CTAAGATTGCGGGCTTAATCATTATGATTGCTGGAGTAGGATTAATTGAAGTAATGTAA

Upstream 100 bases:

>100_bases
ATTGTTGCTTGTGTCATGATTTTTTTAGTTTAAAATAAAGTTATAGTAACGATGGAAACGCTTTAACCGAAACTAGGATA
GCGTTGAAAGGAAGCACATA

Downstream 100 bases:

>100_bases
ACAAAAAACTCGACGGTTATTCGTCGAGTTTTTGTGATTTATGAGGAGTGATGTTAAATGATTTTTGAAAACTAAATTGA
TCAGGCTTAATTTGGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MGLLMLGLVAGAVVPFQTAVNSRLRTYVISPFVSSLISFMVGTIFLIVIIVLSGGQLLLTNAQLHAIPWWMYLGGVLGMI
GLTTNILLFPILGSVQTVIMPVLGQIMMSMIIDNYGMFGTTRHPLSLMRMVGVLLLIVGVLIVVALPEYLARNSMKRPPE
QRVKWKWLWQIFGVLVGGMLAIQAALNGRLGGLLQAPIHAALISFFIGTIMLFLVAVFQGTLKNIRLVVQQKTPWWVWIG
GFFGAAYIFLNAYLVPQIGTGTVVVLVLLGQIISSLNIDQFGLLGSMKSSISVAKIAGLIIMIAGVGLIEVM

Sequences:

>Translated_312_residues
MGLLMLGLVAGAVVPFQTAVNSRLRTYVISPFVSSLISFMVGTIFLIVIIVLSGGQLLLTNAQLHAIPWWMYLGGVLGMI
GLTTNILLFPILGSVQTVIMPVLGQIMMSMIIDNYGMFGTTRHPLSLMRMVGVLLLIVGVLIVVALPEYLARNSMKRPPE
QRVKWKWLWQIFGVLVGGMLAIQAALNGRLGGLLQAPIHAALISFFIGTIMLFLVAVFQGTLKNIRLVVQQKTPWWVWIG
GFFGAAYIFLNAYLVPQIGTGTVVVLVLLGQIISSLNIDQFGLLGSMKSSISVAKIAGLIIMIAGVGLIEVM
>Mature_311_residues
GLLMLGLVAGAVVPFQTAVNSRLRTYVISPFVSSLISFMVGTIFLIVIIVLSGGQLLLTNAQLHAIPWWMYLGGVLGMIG
LTTNILLFPILGSVQTVIMPVLGQIMMSMIIDNYGMFGTTRHPLSLMRMVGVLLLIVGVLIVVALPEYLARNSMKRPPEQ
RVKWKWLWQIFGVLVGGMLAIQAALNGRLGGLLQAPIHAALISFFIGTIMLFLVAVFQGTLKNIRLVVQQKTPWWVWIGG
FFGAAYIFLNAYLVPQIGTGTVVVLVLLGQIISSLNIDQFGLLGSMKSSISVAKIAGLIIMIAGVGLIEVM

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33792; Mature: 33661

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLMLGLVAGAVVPFQTAVNSRLRTYVISPFVSSLISFMVGTIFLIVIIVLSGGQLLLT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
NAQLHAIPWWMYLGGVLGMIGLTTNILLFPILGSVQTVIMPVLGQIMMSMIIDNYGMFGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TRHPLSLMRMVGVLLLIVGVLIVVALPEYLARNSMKRPPEQRVKWKWLWQIFGVLVGGML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIQAALNGRLGGLLQAPIHAALISFFIGTIMLFLVAVFQGTLKNIRLVVQQKTPWWVWIG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHH
GFFGAAYIFLNAYLVPQIGTGTVVVLVLLGQIISSLNIDQFGLLGSMKSSISVAKIAGLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IMIAGVGLIEVM
HHHHHHHHHHCC
>Mature Secondary Structure 
GLLMLGLVAGAVVPFQTAVNSRLRTYVISPFVSSLISFMVGTIFLIVIIVLSGGQLLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
NAQLHAIPWWMYLGGVLGMIGLTTNILLFPILGSVQTVIMPVLGQIMMSMIIDNYGMFGT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TRHPLSLMRMVGVLLLIVGVLIVVALPEYLARNSMKRPPEQRVKWKWLWQIFGVLVGGML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIQAALNGRLGGLLQAPIHAALISFFIGTIMLFLVAVFQGTLKNIRLVVQQKTPWWVWIG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEHH
GFFGAAYIFLNAYLVPQIGTGTVVVLVLLGQIISSLNIDQFGLLGSMKSSISVAKIAGLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IMIAGVGLIEVM
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA