| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is pucI [H]
Identifier: 116492044
GI number: 116492044
Start: 283174
End: 284538
Strand: Direct
Name: pucI [H]
Synonym: PEPE_0240
Alternate gene names: 116492044
Gene position: 283174-284538 (Clockwise)
Preceding gene: 116492043
Following gene: 116492045
Centisome position: 15.45
GC content: 37.07
Gene sequence:
>1365_bases ATGAATACAAAGTACCAAGTAGAAAGTATTGATAAGAAACATCGACATATGACATATTGGGATATGTTTGCAACCTGGGT TGGTGCTAATGCTAACAATGGAACCTGGTTCATCGGTGGAATTATTGCTGCTTGTGGATTCTGGGGCGGAATTAAAGCCT TAATTTTAGCTTCGAGTATTTCATACATATTCTTAATGTTAGTTGGTTATATGGGCACCAAAACTGGAGTTACAACAATG GCGTTGTCACGTGCTTCTTTTGGAATTAGAGGCAGCATTATTCCTTCGATTGTTAATTTGACACAATTTGTTGGTTGGAC AGCGGTTAATACTTTTATTGCTGCGACTTCTGTATCATATATTTTGCACAGCTTCTTGGGATGGCCTGTATATGGTCAAC CGGGTGGAAATCTGGGATTGATTATGGGAATTGCAGTGATGAGTATCCTACATTTAATTAGTATTGTTTCAGGACAGAAA TCCATTCAAATTATTGAACGAATTGGGATTATCTTAGTTATTATCTTTGTGATTTGGGAATCAATAGTAGTTTTTAAAGA TGTATCCTTTAACCAAATCGCTGCTTGGAAAGTTCCAAGCCATCTTAAAATGGGGTTTGGGACGGCCATGGACACGTTAG CCGCCTTTAATTTAGCGTGGGTGACTGCTGGCGCGGATTTTACTAGATTTACTAAGAAATCTGTTACAGCGACCACCGCA CCTTTTCTAGGAGCAAACTTAGGTGTTTTCGGATTTGCATTTATTGGATTAAGTGCCACAATAAGTATTGCAATTAGTTC AGGCGTGTACGATCCTAATAATTCTGATCCAAGTACAATTGCTAATAGATTAGGGTTAGGGCTCATTGCAATGATTGTAA TTATGCTGACTAGCATGACGGCCAATGCCGTCAATATTCAGGCAGCGGGTTCAGCATTAAACAATATGTTCACTAAGCTA ACTTTAAAACAGTCACTACTCATTACCACGGTTATTGCAACCTTAGTAACTTTTATACCGGTTTTCTATGGTAGTTTTTT AGAAACCTTCACCGCTTTCTTGGACTATGTAGGTATGGTTCTAGGACCGATTATTAGTATTATGGTGGTTGATTATTTCC TTATTTCAAAACAGAAATATGATCCTATGGAATTGGGAAATCCAAACGGAAGATACTGGTATAAAAATGGTATCCACTGG ACGGCTTTTATTTTATGGTTAGTAGGCGTAATTTTTTACAGCTTATTACAGAAATTGGACTTTGTTCAAACCTATACTGG GGCAACGTTCATTGTAATGATTATTATTGGAATTTTATATTGGCTAATTATGCAGTTTGAAAAGAGGAACAGCAATGTTA ATTAA
Upstream 100 bases:
>100_bases TTTTGAAAGTTAAATTTGAACCAATTCATCTTTGATTGTGTACAGTGAATCTAGTATAATTTTTTAAAATGTGTAAAAAA TACTAGGAGGAACTGTGCGA
Downstream 100 bases:
>100_bases AAACGTTCATATCGAAAATGATCCTGAAGTAAAAGATGTTAGAATCGAAAATGGAATTTTTAAAGCAATTGGTAAAAATC TTGAAGCATCTGATGACGAG
Product: purine-cytosine permease related protein
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MNTKYQVESIDKKHRHMTYWDMFATWVGANANNGTWFIGGIIAACGFWGGIKALILASSISYIFLMLVGYMGTKTGVTTM ALSRASFGIRGSIIPSIVNLTQFVGWTAVNTFIAATSVSYILHSFLGWPVYGQPGGNLGLIMGIAVMSILHLISIVSGQK SIQIIERIGIILVIIFVIWESIVVFKDVSFNQIAAWKVPSHLKMGFGTAMDTLAAFNLAWVTAGADFTRFTKKSVTATTA PFLGANLGVFGFAFIGLSATISIAISSGVYDPNNSDPSTIANRLGLGLIAMIVIMLTSMTANAVNIQAAGSALNNMFTKL TLKQSLLITTVIATLVTFIPVFYGSFLETFTAFLDYVGMVLGPIISIMVVDYFLISKQKYDPMELGNPNGRYWYKNGIHW TAFILWLVGVIFYSLLQKLDFVQTYTGATFIVMIIIGILYWLIMQFEKRNSNVN
Sequences:
>Translated_454_residues MNTKYQVESIDKKHRHMTYWDMFATWVGANANNGTWFIGGIIAACGFWGGIKALILASSISYIFLMLVGYMGTKTGVTTM ALSRASFGIRGSIIPSIVNLTQFVGWTAVNTFIAATSVSYILHSFLGWPVYGQPGGNLGLIMGIAVMSILHLISIVSGQK SIQIIERIGIILVIIFVIWESIVVFKDVSFNQIAAWKVPSHLKMGFGTAMDTLAAFNLAWVTAGADFTRFTKKSVTATTA PFLGANLGVFGFAFIGLSATISIAISSGVYDPNNSDPSTIANRLGLGLIAMIVIMLTSMTANAVNIQAAGSALNNMFTKL TLKQSLLITTVIATLVTFIPVFYGSFLETFTAFLDYVGMVLGPIISIMVVDYFLISKQKYDPMELGNPNGRYWYKNGIHW TAFILWLVGVIFYSLLQKLDFVQTYTGATFIVMIIIGILYWLIMQFEKRNSNVN >Mature_454_residues MNTKYQVESIDKKHRHMTYWDMFATWVGANANNGTWFIGGIIAACGFWGGIKALILASSISYIFLMLVGYMGTKTGVTTM ALSRASFGIRGSIIPSIVNLTQFVGWTAVNTFIAATSVSYILHSFLGWPVYGQPGGNLGLIMGIAVMSILHLISIVSGQK SIQIIERIGIILVIIFVIWESIVVFKDVSFNQIAAWKVPSHLKMGFGTAMDTLAAFNLAWVTAGADFTRFTKKSVTATTA PFLGANLGVFGFAFIGLSATISIAISSGVYDPNNSDPSTIANRLGLGLIAMIVIMLTSMTANAVNIQAAGSALNNMFTKL TLKQSLLITTVIATLVTFIPVFYGSFLETFTAFLDYVGMVLGPIISIMVVDYFLISKQKYDPMELGNPNGRYWYKNGIHW TAFILWLVGVIFYSLLQKLDFVQTYTGATFIVMIIIGILYWLIMQFEKRNSNVN
Specific function: Transport of allantoin [H]
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=472, Percent_Identity=24.364406779661, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 49745; Mature: 49745
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKYQVESIDKKHRHMTYWDMFATWVGANANNGTWFIGGIIAACGFWGGIKALILASSI CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH SYIFLMLVGYMGTKTGVTTMALSRASFGIRGSIIPSIVNLTQFVGWTAVNTFIAATSVSY HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILHSFLGWPVYGQPGGNLGLIMGIAVMSILHLISIVSGQKSIQIIERIGIILVIIFVIWE HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SIVVFKDVSFNQIAAWKVPSHLKMGFGTAMDTLAAFNLAWVTAGADFTRFTKKSVTATTA HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCHHHCC PFLGANLGVFGFAFIGLSATISIAISSGVYDPNNSDPSTIANRLGLGLIAMIVIMLTSMT CHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ANAVNIQAAGSALNNMFTKLTLKQSLLITTVIATLVTFIPVFYGSFLETFTAFLDYVGMV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPIISIMVVDYFLISKQKYDPMELGNPNGRYWYKNGIHWTAFILWLVGVIFYSLLQKLD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH FVQTYTGATFIVMIIIGILYWLIMQFEKRNSNVN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNTKYQVESIDKKHRHMTYWDMFATWVGANANNGTWFIGGIIAACGFWGGIKALILASSI CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH SYIFLMLVGYMGTKTGVTTMALSRASFGIRGSIIPSIVNLTQFVGWTAVNTFIAATSVSY HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILHSFLGWPVYGQPGGNLGLIMGIAVMSILHLISIVSGQKSIQIIERIGIILVIIFVIWE HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SIVVFKDVSFNQIAAWKVPSHLKMGFGTAMDTLAAFNLAWVTAGADFTRFTKKSVTATTA HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCHHHCC PFLGANLGVFGFAFIGLSATISIAISSGVYDPNNSDPSTIANRLGLGLIAMIVIMLTSMT CHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ANAVNIQAAGSALNNMFTKLTLKQSLLITTVIATLVTFIPVFYGSFLETFTAFLDYVGMV CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPIISIMVVDYFLISKQKYDPMELGNPNGRYWYKNGIHWTAFILWLVGVIFYSLLQKLD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH FVQTYTGATFIVMIIIGILYWLIMQFEKRNSNVN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]