Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
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Accession | NC_008511 |
Length | 299,762 |
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The map label for this gene is 116332585
Identifier: 116332585
GI number: 116332585
Start: 180325
End: 181707
Strand: Direct
Name: 116332585
Synonym: LBJ_4157
Alternate gene names: NA
Gene position: 180325-181707 (Clockwise)
Preceding gene: 116332584
Following gene: 116332586
Centisome position: 60.16
GC content: 40.93
Gene sequence:
>1383_bases ATGAGAATCATCGGAGCGATCAATATCCAATCTTCCTTGTTTATCAGTAGCCTGTCTGCAATTGGGCTAGGGGTTCTCTT ATCCGTTGTACAAGTCAAAACGCCCGAATATTCTCAAGAAACTGAATTTTCGCCTTTCGAAAAAAAGAAGGACTCTTTCA AGTCCAGTCCGACCTTGATGGGAAAACGAGAAAAAGAAATTCAAACACTTCGAATCCTAGGCTCCAAAAAATCGAATCTC TTAACCGAATTGGAAAAAGACCCGCAACTTATGGAAACCAAGGATTTCGGTTTTGCAGGAATCGGCAACACTTGGACTCT ATTTCCTTCTAGAAATAATTTAAAAAAGAATCAATCGGATATTCTCTTCAACAATCTAAACTCAGATTGGGTGGGAACCC GCTTTTTCGACGGTAAACAAAATAAAATTCACATGATGACCTCCGTTCTTCCTCTCGTGCCTTTTTCGGAACTAGCCCCC TTTATGCAGGGGAGAAAAACGGATCCTATCGGAAATATGGATAGAACCGGAATCAATCAGGCTAAGTTAGACTCCTTTGA ATTAAGTTACACGATTTTACCAGGAGTGGAGGCGATTTTGAAAACGGGTAATTCTCTTCCTTACACGGCGGATCAAAAAG ACCAGGGTTATTCTATGGCGGGATTCTCCTTTAAACCGAATGAATATCTCAGTACGAAAATTGTTTCCGGAAGTTCCTTT GGAAATTCGAGTTTATCCACAAACAGACTTTCCTATTCTCCTCATTCCGCAAATATACAGCCTGTGAATATAGATCCGAA CGTCGGAACCAATCCGATTCTTAGAAATCAGGCTCTGGGAAATACAGGTGGAAGAGTCATCGAGTGGCAAGCGAGCATCC AACCTGTAAAACGTCTTTTGTTCCAAACTTCCGTTTTAAACAAGGAAAAAGAAAAAGGACTTTATAACCCGGAAGCCGCT CGTTTTTCGATGTTCATCGACTTCTCAAAAATCATCCTCAATGTGCGGTACAGTTATTCTGCAGACCCGACCGCAAAAAA CAACGGACTTTATATCACTCCGGAATCCGACGCGACTACTTTAGGATTTACAATGCTTTTGGATCCCGCAGGGAGATATT CTTTATTTTTTGGAAACAATTATTACAATCTTCTTTCTTCTAGACCTTCTGGAATTAATACCCAGGTAGACGAACCTCTG CGTTCGTTTTCTGCAAGTTTCCGTGGAAAGACCAGTTTCCAGAGTGCAATCTTTTTTATGAACTTCAGGAATAACCTTTC CAAAGGTGTGATTTATACGGATGTGGGTCCGCTTAGACTTCCGGCATTCTCTCAGTATTATACGGAATACTTTACTTCCT TAGGAATGGAACTTTCCTTTTGA
Upstream 100 bases:
>100_bases AGATTTTCTGTCTGAATGTTTTTTGGAAATTTTCGTTTTAAATCGGGCCTATATTTGCGACTGTTCCTTCAATTTTGATT ACCGATAATAAATTTAGTAT
Downstream 100 bases:
>100_bases TTTCTTTTCTGGTTGCCCATTTTTAACATTTTTAGAATTTGATCGAGAGAGAATTTTCGATCAATCGCTTCGGTTCACAG GAAATACTCAATTCAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MRIIGAINIQSSLFISSLSAIGLGVLLSVVQVKTPEYSQETEFSPFEKKKDSFKSSPTLMGKREKEIQTLRILGSKKSNL LTELEKDPQLMETKDFGFAGIGNTWTLFPSRNNLKKNQSDILFNNLNSDWVGTRFFDGKQNKIHMMTSVLPLVPFSELAP FMQGRKTDPIGNMDRTGINQAKLDSFELSYTILPGVEAILKTGNSLPYTADQKDQGYSMAGFSFKPNEYLSTKIVSGSSF GNSSLSTNRLSYSPHSANIQPVNIDPNVGTNPILRNQALGNTGGRVIEWQASIQPVKRLLFQTSVLNKEKEKGLYNPEAA RFSMFIDFSKIILNVRYSYSADPTAKNNGLYITPESDATTLGFTMLLDPAGRYSLFFGNNYYNLLSSRPSGINTQVDEPL RSFSASFRGKTSFQSAIFFMNFRNNLSKGVIYTDVGPLRLPAFSQYYTEYFTSLGMELSF
Sequences:
>Translated_460_residues MRIIGAINIQSSLFISSLSAIGLGVLLSVVQVKTPEYSQETEFSPFEKKKDSFKSSPTLMGKREKEIQTLRILGSKKSNL LTELEKDPQLMETKDFGFAGIGNTWTLFPSRNNLKKNQSDILFNNLNSDWVGTRFFDGKQNKIHMMTSVLPLVPFSELAP FMQGRKTDPIGNMDRTGINQAKLDSFELSYTILPGVEAILKTGNSLPYTADQKDQGYSMAGFSFKPNEYLSTKIVSGSSF GNSSLSTNRLSYSPHSANIQPVNIDPNVGTNPILRNQALGNTGGRVIEWQASIQPVKRLLFQTSVLNKEKEKGLYNPEAA RFSMFIDFSKIILNVRYSYSADPTAKNNGLYITPESDATTLGFTMLLDPAGRYSLFFGNNYYNLLSSRPSGINTQVDEPL RSFSASFRGKTSFQSAIFFMNFRNNLSKGVIYTDVGPLRLPAFSQYYTEYFTSLGMELSF >Mature_460_residues MRIIGAINIQSSLFISSLSAIGLGVLLSVVQVKTPEYSQETEFSPFEKKKDSFKSSPTLMGKREKEIQTLRILGSKKSNL LTELEKDPQLMETKDFGFAGIGNTWTLFPSRNNLKKNQSDILFNNLNSDWVGTRFFDGKQNKIHMMTSVLPLVPFSELAP FMQGRKTDPIGNMDRTGINQAKLDSFELSYTILPGVEAILKTGNSLPYTADQKDQGYSMAGFSFKPNEYLSTKIVSGSSF GNSSLSTNRLSYSPHSANIQPVNIDPNVGTNPILRNQALGNTGGRVIEWQASIQPVKRLLFQTSVLNKEKEKGLYNPEAA RFSMFIDFSKIILNVRYSYSADPTAKNNGLYITPESDATTLGFTMLLDPAGRYSLFFGNNYYNLLSSRPSGINTQVDEPL RSFSASFRGKTSFQSAIFFMNFRNNLSKGVIYTDVGPLRLPAFSQYYTEYFTSLGMELSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51343; Mature: 51343
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIGAINIQSSLFISSLSAIGLGVLLSVVQVKTPEYSQETEFSPFEKKKDSFKSSPTLM CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC GKREKEIQTLRILGSKKSNLLTELEKDPQLMETKDFGFAGIGNTWTLFPSRNNLKKNQSD CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCEECCCEEEECCCCCCCCCCCCC ILFNNLNSDWVGTRFFDGKQNKIHMMTSVLPLVPFSELAPFMQGRKTDPIGNMDRTGINQ EEEECCCCCCCEEEEECCCCCEEEHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCH AKLDSFELSYTILPGVEAILKTGNSLPYTADQKDQGYSMAGFSFKPNEYLSTKIVSGSSF HHCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCC GNSSLSTNRLSYSPHSANIQPVNIDPNVGTNPILRNQALGNTGGRVIEWQASIQPVKRLL CCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH FQTSVLNKEKEKGLYNPEAARFSMFIDFSKIILNVRYSYSADPTAKNNGLYITPESDATT HHHHHHCCHHHCCCCCCCCCEEEEEEEEEHEEEEEEECCCCCCCCCCCCEEEECCCCCCE LGFTMLLDPAGRYSLFFGNNYYNLLSSRPSGINTQVDEPLRSFSASFRGKTSFQSAIFFM EEEEEEECCCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEE NFRNNLSKGVIYTDVGPLRLPAFSQYYTEYFTSLGMELSF ECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MRIIGAINIQSSLFISSLSAIGLGVLLSVVQVKTPEYSQETEFSPFEKKKDSFKSSPTLM CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC GKREKEIQTLRILGSKKSNLLTELEKDPQLMETKDFGFAGIGNTWTLFPSRNNLKKNQSD CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCEECCCEEEECCCCCCCCCCCCC ILFNNLNSDWVGTRFFDGKQNKIHMMTSVLPLVPFSELAPFMQGRKTDPIGNMDRTGINQ EEEECCCCCCCEEEEECCCCCEEEHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCH AKLDSFELSYTILPGVEAILKTGNSLPYTADQKDQGYSMAGFSFKPNEYLSTKIVSGSSF HHCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCC GNSSLSTNRLSYSPHSANIQPVNIDPNVGTNPILRNQALGNTGGRVIEWQASIQPVKRLL CCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHH FQTSVLNKEKEKGLYNPEAARFSMFIDFSKIILNVRYSYSADPTAKNNGLYITPESDATT HHHHHHCCHHHCCCCCCCCCEEEEEEEEEHEEEEEEECCCCCCCCCCCCEEEECCCCCCE LGFTMLLDPAGRYSLFFGNNYYNLLSSRPSGINTQVDEPLRSFSASFRGKTSFQSAIFFM EEEEEEECCCCCEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEEE NFRNNLSKGVIYTDVGPLRLPAFSQYYTEYFTSLGMELSF ECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA