Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
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Accession | NC_008511 |
Length | 299,762 |
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The map label for this gene is 116332548
Identifier: 116332548
GI number: 116332548
Start: 131347
End: 132702
Strand: Direct
Name: 116332548
Synonym: LBJ_4114
Alternate gene names: NA
Gene position: 131347-132702 (Clockwise)
Preceding gene: 116332547
Following gene: 116332563
Centisome position: 43.82
GC content: 36.43
Gene sequence:
>1356_bases ATGACAACTTCTAAAAGTTTGAAGATTCGATCCTTTGACGAAGGTGAAATTGAACAGTTCAAGAATGTCTTTATCAACGA AAACAGAGGTAAGCCGATTGTTCTTCTTCGATTTCAAGATATAAAATCCTTATCCTTTATCAATTTTTTACAACTTGTTC CAATCAAAATATCGGAATTGTGTCCCGGTGTGGAAAATCACTATTCTTATTATTGTTATGGAGATAAAAAGAATCTGCTG ATCGGAGTTGCTCCGAGTCAAATGAGCGGCGGCTCAAACGGATTTTTAAACTTTGATTCGCTTCTTGGACGATTCAGAGA AATTTCAATCAAAAACGGTTCTATGAATTTCGATTTCGGAATTGCAAGAACCCAATGTAATTATATTTCTTATGTGGACG AAATTTTTCATGAATTGGAAGTTTCTTCGCTCAAAAATTTGCAGGACAATCTCATCCGTTGGAGTTGGACTTATCTCAAT CGGGTCAATGATTATTTTGCCGGCGAAAAAGCGGATGCTGTCATTCAGCCGATTATTTACTACAACCACAAGACACATAC CTATTCTATGAAAGGAGGGGAGGTTTTTGTCGGAGGAGAAGCGTACTCGGGTTATGCAGATCTTATTCGGGATATTCCTC ACGATCAGGATCTAAATCGAATCGAACTTCTTATTTTGGAAAAATTAACGGTGTGCTGTAACGGAGCCCCCGGTCTTTTA AAATTCAACATTTCTCCGCAGACTCTTATCGATACGTTCGATACAGACGAAAAGGTAACTCGTTTTCATAATCTTCTTCT CAATCAAAATCTAAATCCGGCTCTCATAAGAATGGAATTAATCGAAAAGCCGTACGAAGAGGTAGATGTCACACTCAAGA GTGTATGTAAGAGATTTTGGAATTTCGGCATCAGTTTTGCGGCGGATGATTTCGGAGTTAAAAGTCAAAGCCATCAGATC GTTTTGGATTTGGGAGAAATGATTAAAGAATTTAAACTTGATCCCATCAGTTTTAAATTTAAGGCCAATCAAGATCTTAC CAAATTCTTGGATAACTTAGCATTTATAGATTATTGCAGAAGACTTTCTGACAATCGGGAAGCGATTATCACAGCCGAGG CTTTGGAAGACATAGATTCCTTGAACTTCTTAATTACGCACCAAGTTTATTATTTTCAAACGAATCTGTTTTGTAAGAAG ATTTCCGTCGAAGAATATAAGGAAATTTTTAAGGACATGCAGGATCTTCCTGAAACGATCGTAAATCAAATTTTGAGTTC AGAAGAACTTCTTTTCAGACTAAGTAAAAAAGGAAATATCTTCAAACTTGCAAAAGAATTGGAACTTGTTTCTTAA
Upstream 100 bases:
>100_bases TATTCCTTTTAAGGCTTTACAAAGAGGATCTCTTATTGGAATTATTGGAACGAATCGGTGTTCAGATTTTAGACTGACGG ATTTTTTGAATAAGATTACA
Downstream 100 bases:
>100_bases ACGAAAGTTTATGTGAGAATTGGATCTAAAAATTTTATACCGCTTACCTTCCGAGTTAAGTTTTATTTAACGTGAATTCG ATATAAAAAAGTTTGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTTSKSLKIRSFDEGEIEQFKNVFINENRGKPIVLLRFQDIKSLSFINFLQLVPIKISELCPGVENHYSYYCYGDKKNLL IGVAPSQMSGGSNGFLNFDSLLGRFREISIKNGSMNFDFGIARTQCNYISYVDEIFHELEVSSLKNLQDNLIRWSWTYLN RVNDYFAGEKADAVIQPIIYYNHKTHTYSMKGGEVFVGGEAYSGYADLIRDIPHDQDLNRIELLILEKLTVCCNGAPGLL KFNISPQTLIDTFDTDEKVTRFHNLLLNQNLNPALIRMELIEKPYEEVDVTLKSVCKRFWNFGISFAADDFGVKSQSHQI VLDLGEMIKEFKLDPISFKFKANQDLTKFLDNLAFIDYCRRLSDNREAIITAEALEDIDSLNFLITHQVYYFQTNLFCKK ISVEEYKEIFKDMQDLPETIVNQILSSEELLFRLSKKGNIFKLAKELELVS
Sequences:
>Translated_451_residues MTTSKSLKIRSFDEGEIEQFKNVFINENRGKPIVLLRFQDIKSLSFINFLQLVPIKISELCPGVENHYSYYCYGDKKNLL IGVAPSQMSGGSNGFLNFDSLLGRFREISIKNGSMNFDFGIARTQCNYISYVDEIFHELEVSSLKNLQDNLIRWSWTYLN RVNDYFAGEKADAVIQPIIYYNHKTHTYSMKGGEVFVGGEAYSGYADLIRDIPHDQDLNRIELLILEKLTVCCNGAPGLL KFNISPQTLIDTFDTDEKVTRFHNLLLNQNLNPALIRMELIEKPYEEVDVTLKSVCKRFWNFGISFAADDFGVKSQSHQI VLDLGEMIKEFKLDPISFKFKANQDLTKFLDNLAFIDYCRRLSDNREAIITAEALEDIDSLNFLITHQVYYFQTNLFCKK ISVEEYKEIFKDMQDLPETIVNQILSSEELLFRLSKKGNIFKLAKELELVS >Mature_450_residues TTSKSLKIRSFDEGEIEQFKNVFINENRGKPIVLLRFQDIKSLSFINFLQLVPIKISELCPGVENHYSYYCYGDKKNLLI GVAPSQMSGGSNGFLNFDSLLGRFREISIKNGSMNFDFGIARTQCNYISYVDEIFHELEVSSLKNLQDNLIRWSWTYLNR VNDYFAGEKADAVIQPIIYYNHKTHTYSMKGGEVFVGGEAYSGYADLIRDIPHDQDLNRIELLILEKLTVCCNGAPGLLK FNISPQTLIDTFDTDEKVTRFHNLLLNQNLNPALIRMELIEKPYEEVDVTLKSVCKRFWNFGISFAADDFGVKSQSHQIV LDLGEMIKEFKLDPISFKFKANQDLTKFLDNLAFIDYCRRLSDNREAIITAEALEDIDSLNFLITHQVYYFQTNLFCKKI SVEEYKEIFKDMQDLPETIVNQILSSEELLFRLSKKGNIFKLAKELELVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52046; Mature: 51915
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSKSLKIRSFDEGEIEQFKNVFINENRGKPIVLLRFQDIKSLSFINFLQLVPIKISEL CCCCCCCEEECCCCHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHH CPGVENHYSYYCYGDKKNLLIGVAPSQMSGGSNGFLNFDSLLGRFREISIKNGSMNFDFG CCCCCCCCEEEEEECCCCEEEEECCHHCCCCCCCCEEHHHHHHHHHEEEEECCCCCCCCC IARTQCNYISYVDEIFHELEVSSLKNLQDNLIRWSWTYLNRVNDYFAGEKADAVIQPIIY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCHHHEEEEE YNHKTHTYSMKGGEVFVGGEAYSGYADLIRDIPHDQDLNRIELLILEKLTVCCNGAPGLL ECCCEEEEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEE KFNISPQTLIDTFDTDEKVTRFHNLLLNQNLNPALIRMELIEKPYEEVDVTLKSVCKRFW EECCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH NFGISFAADDFGVKSQSHQIVLDLGEMIKEFKLDPISFKFKANQDLTKFLDNLAFIDYCR HCCCEEECCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH RLSDNREAIITAEALEDIDSLNFLITHQVYYFQTNLFCKKISVEEYKEIFKDMQDLPETI HHCCCCCEEEEHHHHHHHHHCCEEEEEEEEEEEECHHEEECCHHHHHHHHHHHHHHHHHH VNQILSSEELLFRLSKKGNIFKLAKELELVS HHHHHCCHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure TTSKSLKIRSFDEGEIEQFKNVFINENRGKPIVLLRFQDIKSLSFINFLQLVPIKISEL CCCCCCEEECCCCHHHHHHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHH CPGVENHYSYYCYGDKKNLLIGVAPSQMSGGSNGFLNFDSLLGRFREISIKNGSMNFDFG CCCCCCCCEEEEEECCCCEEEEECCHHCCCCCCCCEEHHHHHHHHHEEEEECCCCCCCCC IARTQCNYISYVDEIFHELEVSSLKNLQDNLIRWSWTYLNRVNDYFAGEKADAVIQPIIY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCCCHHHEEEEE YNHKTHTYSMKGGEVFVGGEAYSGYADLIRDIPHDQDLNRIELLILEKLTVCCNGAPGLL ECCCEEEEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEE KFNISPQTLIDTFDTDEKVTRFHNLLLNQNLNPALIRMELIEKPYEEVDVTLKSVCKRFW EECCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH NFGISFAADDFGVKSQSHQIVLDLGEMIKEFKLDPISFKFKANQDLTKFLDNLAFIDYCR HCCCEEECCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH RLSDNREAIITAEALEDIDSLNFLITHQVYYFQTNLFCKKISVEEYKEIFKDMQDLPETI HHCCCCCEEEEHHHHHHHHHCCEEEEEEEEEEEECHHEEECCHHHHHHHHHHHHHHHHHH VNQILSSEELLFRLSKKGNIFKLAKELELVS HHHHHCCHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA