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The map label for this gene is rimP

Identifier: 116328715

GI number: 116328715

Start: 2448343

End: 2448831

Strand: Reverse

Name: rimP

Synonym: LBL_2089

Alternate gene names: 116328715

Gene position: 2448831-2448343 (Counterclockwise)

Preceding gene: 116328719

Following gene: 116328714

Centisome position: 67.75

GC content: 43.15

Gene sequence:

>489_bases
TTGACAGTAAGCAGGGAAGAAATCAGTACTATTCTGGATGACGCCTTGTTTTTGCCTGTCAAGCTGTACTCATTAAAGGT
CAACCAAAGGCCTAATCACTCGTTGATCGAGGTCGTCTTGGACAATCTTGAACATCCGTATGGTTCAGTCAGCCTTCTGG
AATGTGAGCAAGTTTCCAGAAAACTGAAAGAAGAGTTAGAACGGATCTCACCGGATCTGGATTTTACTCTGAAAGTTTCT
TCTGCAGGTGCGGAAAGGAAACTTCATCTTCCGGAAGACATAGATCGTTTTCGGGGGATACCGGTTCGTTTGGTTTTTCG
ATCCGGAGAATCAGAGAAAAACCAAGAAGGAATTTTTCGGATCGTGAATCGGGATGGGGATCAGGTGTTTCTGGAAAAAT
TCCAAAAGGGAAAGAAATCTGCCGTAAAAAAGCAGACGACCCTGAACCTCAAGGATATACTGAAAGGGAATCTTTACGTA
AGTATTTGA

Upstream 100 bases:

>100_bases
CTTGGGTTTTTTTACTTTACACTGTAACTAAATCTGAATAGTTTGATTAGGATATCAGGAAAAATTCATTCATTTTGAGT
TTTCTCTCTAAGGCCGGGGT

Downstream 100 bases:

>100_bases
TATGGCAGTTAAGAAGACACAATCGGAAGGAAATCTGTTGGAAGTGATTCAACAATTTTGCGCGGACAAGTCCCTCGATC
GGGAAGCCGTTATGGGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTVSREEISTILDDALFLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERISPDLDFTLKVS
SAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQEGIFRIVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGNLYV
SI

Sequences:

>Translated_162_residues
MTVSREEISTILDDALFLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERISPDLDFTLKVS
SAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQEGIFRIVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGNLYV
SI
>Mature_161_residues
TVSREEISTILDDALFLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERISPDLDFTLKVSS
AGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQEGIFRIVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGNLYVS
I

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_LEPBJ (Q04U33)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_800345.1
- STRING:   Q04U33
- GeneID:   4409840
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_0944
- HOGENOM:   HBG527811
- ProtClustDB:   PRK14635
- BioCyc:   LBOR355277:LBJ_0944-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18537; Mature: 18405

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSREEISTILDDALFLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSR
CCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHH
KLKEELERISPDLDFTLKVSSAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQEGIFR
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEE
IVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGNLYVSI
EECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEC
>Mature Secondary Structure 
TVSREEISTILDDALFLPVKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSR
CCCHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHH
KLKEELERISPDLDFTLKVSSAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQEGIFR
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEE
IVNRDGDQVFLEKFQKGKKSAVKKQTTLNLKDILKGNLYVSI
EECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA