Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
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Accession | NC_008508 |
Length | 3,614,446 |
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The map label for this gene is 116328445
Identifier: 116328445
GI number: 116328445
Start: 2080085
End: 2081473
Strand: Direct
Name: 116328445
Synonym: LBL_1787
Alternate gene names: NA
Gene position: 2080085-2081473 (Clockwise)
Preceding gene: 116328444
Following gene: 116328446
Centisome position: 57.55
GC content: 39.96
Gene sequence:
>1389_bases ATCTACCGTCTTATTTCCAATCCAAACGGCACCTTAAATTTAGAGGAAATCCAATCGGGTTTCCTTTTTCATTCCCGCTT CCATCCCACTTCCGAAGGGGAAAGAATTGCCGAGCAGATTCCGACTCCGCAATCCGACCGGGAAACGATTTTGATTTTCG GTTTCGGCTTAGGCTATCACGTAGAGGCTTATCTTCAAAAAGCAAATAAACCGGTTAATGTTCTTATACTTGAACCTATC GTTGCTTTAAAGTCGATCGTCGAAAAATTTTCCGAAAGAATTTCAAAGTCCTATAAAATGCATGGCCATCGAATTCGAAT TGTTTTTGGTCTGGATGAATTTTTGTCCCAACCGCTTTCTTTTTGGCTTTTTCAAGACACAAACAAAATTTCCCCCTTTT TACACCCGGTTTATTCCAGGAAGTTTCAAGATCTTGCTTTGAGTTTTTTGGATTCTCTCAAACAAAATTCTCAGAACATT GCGGCAAGAAATTACTTTCAAAGGATTTGGGTACGTAATTGTGTTCGAAATCTTACGAGTATATTTGAGAATTCGAATCC TTCTTTGATTCTTACGGGAGCTAAGGACGATTTTTTCAAAGATCAAACTCTTCTTTTTACCGGCGCGAGTCCCTCTTTGG AAGAGGAAACGGATTGGATTCTTAAAAATAGAAATCGATTTCATTTGCTCGCTTCGGATACTTCCTTAGGTTGGATTTTA AATTTTGGAATCGTACCCGACGCGGTTTTAAGTCTGGATTCGTCTAGGGGAACTCTATTCCATTTTCGGAATATTCTTCC TAAAAAACTTCCCATCCTTACCTGGCTGGGAGGTTCCACCTATATCTTCGATCTTCCGAATCCCAAATGGATTTATTTTT CCACACATCCCTTGGATCAAATTCTCAGATCTCTTTTTTTTTCCCAAGCTCCGATCTTGGAAAATCCGTCTTTGAACATG GCCGGAATAGCAGTATCTTTCGCCAAACAATTGAAATACGATCGACTGATTTTAAAGGGCGTGGACTTTCAGAGGAACGG AGGTAGAACCCATTGTAGGTCGAGCGGTTACGAGGTCTACGACCGATTCTTCCTTTCTAGAAAGGAAAGTTTGTTCAAGA CCCGGTTTCAAAAATCGAAATCTTGGGAAAAGAGATTCTCCATTTTAGAAATCTTAAAAAAACAGTCTTCAGAACTTTTT AAGTCCGATCCGATGTCTAATTTTCCAAAGGCAGAAATTAAGAAACTCGCAGAAGGTTTGGTCTGGGAGGACCCAAAAAA GATTCGACTCGAACAATGGATTCGGTTTTGTACCGTACACTCGGATTTAGACCTAAAGAATTACTTTTCACCCCGAATTC TAAACATTCCTCCGGTAATCGAGTCCTAA
Upstream 100 bases:
>100_bases CGATGAAGATGATGACGAGGAAGATGATGATGACGACGACGAAGACGATGATGAGGATGATGAAGAAGAAGAGGACGAGG ATTAGAGGTTCCCTAAGCTT
Downstream 100 bases:
>100_bases ATTTGAAAGAAGTAATTCTCAAAGAAATCGTTATATCCTCTTGACATTTCCATAGAAAAGAAGCAACTCTCCTTCTAAGA TACTTTCCGAGTTGGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MYRLISNPNGTLNLEEIQSGFLFHSRFHPTSEGERIAEQIPTPQSDRETILIFGFGLGYHVEAYLQKANKPVNVLILEPI VALKSIVEKFSERISKSYKMHGHRIRIVFGLDEFLSQPLSFWLFQDTNKISPFLHPVYSRKFQDLALSFLDSLKQNSQNI AARNYFQRIWVRNCVRNLTSIFENSNPSLILTGAKDDFFKDQTLLFTGASPSLEEETDWILKNRNRFHLLASDTSLGWIL NFGIVPDAVLSLDSSRGTLFHFRNILPKKLPILTWLGGSTYIFDLPNPKWIYFSTHPLDQILRSLFFSQAPILENPSLNM AGIAVSFAKQLKYDRLILKGVDFQRNGGRTHCRSSGYEVYDRFFLSRKESLFKTRFQKSKSWEKRFSILEILKKQSSELF KSDPMSNFPKAEIKKLAEGLVWEDPKKIRLEQWIRFCTVHSDLDLKNYFSPRILNIPPVIES
Sequences:
>Translated_462_residues MYRLISNPNGTLNLEEIQSGFLFHSRFHPTSEGERIAEQIPTPQSDRETILIFGFGLGYHVEAYLQKANKPVNVLILEPI VALKSIVEKFSERISKSYKMHGHRIRIVFGLDEFLSQPLSFWLFQDTNKISPFLHPVYSRKFQDLALSFLDSLKQNSQNI AARNYFQRIWVRNCVRNLTSIFENSNPSLILTGAKDDFFKDQTLLFTGASPSLEEETDWILKNRNRFHLLASDTSLGWIL NFGIVPDAVLSLDSSRGTLFHFRNILPKKLPILTWLGGSTYIFDLPNPKWIYFSTHPLDQILRSLFFSQAPILENPSLNM AGIAVSFAKQLKYDRLILKGVDFQRNGGRTHCRSSGYEVYDRFFLSRKESLFKTRFQKSKSWEKRFSILEILKKQSSELF KSDPMSNFPKAEIKKLAEGLVWEDPKKIRLEQWIRFCTVHSDLDLKNYFSPRILNIPPVIES >Mature_462_residues MYRLISNPNGTLNLEEIQSGFLFHSRFHPTSEGERIAEQIPTPQSDRETILIFGFGLGYHVEAYLQKANKPVNVLILEPI VALKSIVEKFSERISKSYKMHGHRIRIVFGLDEFLSQPLSFWLFQDTNKISPFLHPVYSRKFQDLALSFLDSLKQNSQNI AARNYFQRIWVRNCVRNLTSIFENSNPSLILTGAKDDFFKDQTLLFTGASPSLEEETDWILKNRNRFHLLASDTSLGWIL NFGIVPDAVLSLDSSRGTLFHFRNILPKKLPILTWLGGSTYIFDLPNPKWIYFSTHPLDQILRSLFFSQAPILENPSLNM AGIAVSFAKQLKYDRLILKGVDFQRNGGRTHCRSSGYEVYDRFFLSRKESLFKTRFQKSKSWEKRFSILEILKKQSSELF KSDPMSNFPKAEIKKLAEGLVWEDPKKIRLEQWIRFCTVHSDLDLKNYFSPRILNIPPVIES
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53603; Mature: 53603
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRLISNPNGTLNLEEIQSGFLFHSRFHPTSEGERIAEQIPTPQSDRETILIFGFGLGYH CCEEECCCCCCEEHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCHH VEAYLQKANKPVNVLILEPIVALKSIVEKFSERISKSYKMHGHRIRIVFGLDEFLSQPLS HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCHHH FWLFQDTNKISPFLHPVYSRKFQDLALSFLDSLKQNSQNIAARNYFQRIWVRNCVRNLTS EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IFENSNPSLILTGAKDDFFKDQTLLFTGASPSLEEETDWILKNRNRFHLLASDTSLGWIL HHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEE NFGIVPDAVLSLDSSRGTLFHFRNILPKKLPILTWLGGSTYIFDLPNPKWIYFSTHPLDQ ECCCCCHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCHHH ILRSLFFSQAPILENPSLNMAGIAVSFAKQLKYDRLILKGVDFQRNGGRTHCRSSGYEVY HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH DRFFLSRKESLFKTRFQKSKSWEKRFSILEILKKQSSELFKSDPMSNFPKAEIKKLAEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC VWEDPKKIRLEQWIRFCTVHSDLDLKNYFSPRILNIPPVIES CCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCEECCCCCCCC >Mature Secondary Structure MYRLISNPNGTLNLEEIQSGFLFHSRFHPTSEGERIAEQIPTPQSDRETILIFGFGLGYH CCEEECCCCCCEEHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCHH VEAYLQKANKPVNVLILEPIVALKSIVEKFSERISKSYKMHGHRIRIVFGLDEFLSQPLS HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCHHH FWLFQDTNKISPFLHPVYSRKFQDLALSFLDSLKQNSQNIAARNYFQRIWVRNCVRNLTS EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IFENSNPSLILTGAKDDFFKDQTLLFTGASPSLEEETDWILKNRNRFHLLASDTSLGWIL HHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEE NFGIVPDAVLSLDSSRGTLFHFRNILPKKLPILTWLGGSTYIFDLPNPKWIYFSTHPLDQ ECCCCCHHHHHCCCCCCHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCHHH ILRSLFFSQAPILENPSLNMAGIAVSFAKQLKYDRLILKGVDFQRNGGRTHCRSSGYEVY HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH DRFFLSRKESLFKTRFQKSKSWEKRFSILEILKKQSSELFKSDPMSNFPKAEIKKLAEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC VWEDPKKIRLEQWIRFCTVHSDLDLKNYFSPRILNIPPVIES CCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA