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The map label for this gene is yfdH [C]

Identifier: 116328427

GI number: 116328427

Start: 2059615

End: 2060748

Strand: Direct

Name: yfdH [C]

Synonym: LBL_1768

Alternate gene names: 116328427

Gene position: 2059615-2060748 (Clockwise)

Preceding gene: 116328426

Following gene: 116328428

Centisome position: 56.98

GC content: 42.5

Gene sequence:

>1134_bases
ATGAAAAAAAAGAACGTCACTTACGTAATCCCTTGTTTGAACGAGGAAAAAACCCTTCCTCTCGTTTTGGAAAAACTCGC
GCGGCTCAAAAAGGAATTAAAACAATACAATGTGGAAATTCTTGTCTCCGATAACGGAAGCGAAGATAAATCGATATCAA
TCGCTAAAAAATACGGCGCAAAAGTCGTTCATTGCGAAGAAAGAGGATACGGGGCAGCGCTCAATTTCGGAATCAAAAAC
GCAAGTGGAGAAATCGTTCTGTTTGCGGACGCGGACGACACTTATGACTTTCTGGAATCTCCAGCGCTTCTTGCGGAGAT
GGAAAAGGGCGCGGAGTTCGTAATCGGTTCCCGTCTAGACGGATCGATTCATAAAGGGGCAATGCCGTTCCTGCACCGTT
ATCTGGGCACTCCGGTGATCAATTGGATTATCAATTTATTATATTCTAAAAAGGGAAATCGTGTTAAAGACGCAAATTCC
GGTTTTCGATGCTTTTTGAAAAAAAAATTTCTGGAATGGGAAATTGAAAGTACCGGAATGGAATTCGCATCCGAGATGCT
CGTGAAAGCGCTTCGAAGCGGAGTCAAACTTTCCCATGTCCCGATCAGTTTGTACCCGGACGTGGAAGGAAGAGTTCCTC
ATTTGAGAACTTGGAGAGACGGCATGAGGCATCTTCTGCAGATTCTCATTCATTCTCAACAGCTTTTTTATTACACGGGC
CTTATACTTTTCTGGATCGGCTGGGCGTTTACGATTTTGGGTTATTTTACGGGAATCGTTGCAATCGGCCCCTTCCATAT
CTTCGGGATTCACTCTCTCACCGTTTTCCTTCTGGTAGCGACATTCGGACAGACGATCTGGGCGATCGGCTTGTTTCTCG
CGGCTCGTAAAACACCCGAGTTAAGTTTTTATTCCAGATTAAATCTCTTATCCGAGGATCTTCTTTTCTGGTATTCAGCG
AGGATGATTTTATTCGTAATTTTACTTTTCGCGTTCATCTTGTTCCGATGGTGGAAAAATTCCTTTCAAGTTCTCGATTT
GGAAAAAGAGATTTTAATGATAAGTTTCCTTAGTGTTCAAATCCTGAATTTAATCGGACAAACGATTACGGCTCACTTAT
TAAAAAGAACATAA

Upstream 100 bases:

>100_bases
TTCGTTATTCGCTCAAAAAATATTCGATCGAAAAGATCAGTTGTTCTACGGAATGAGAGTCATCACCATCCGCAAAAGGT
AATTTTCTAAATCTAAAACT

Downstream 100 bases:

>100_bases
CGAGCGATCCATAGTGAGCGAGTTAGACAAATTTACGCGGAGCGTTTAAAATTTGTCTTTCAACACGTTAGTTGAAAAAT
AGAGCGAAGCGGAGCGTTTA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKKKNVTYVIPCLNEEKTLPLVLEKLARLKKELKQYNVEILVSDNGSEDKSISIAKKYGAKVVHCEERGYGAALNFGIKN
ASGEIVLFADADDTYDFLESPALLAEMEKGAEFVIGSRLDGSIHKGAMPFLHRYLGTPVINWIINLLYSKKGNRVKDANS
GFRCFLKKKFLEWEIESTGMEFASEMLVKALRSGVKLSHVPISLYPDVEGRVPHLRTWRDGMRHLLQILIHSQQLFYYTG
LILFWIGWAFTILGYFTGIVAIGPFHIFGIHSLTVFLLVATFGQTIWAIGLFLAARKTPELSFYSRLNLLSEDLLFWYSA
RMILFVILLFAFILFRWWKNSFQVLDLEKEILMISFLSVQILNLIGQTITAHLLKRT

Sequences:

>Translated_377_residues
MKKKNVTYVIPCLNEEKTLPLVLEKLARLKKELKQYNVEILVSDNGSEDKSISIAKKYGAKVVHCEERGYGAALNFGIKN
ASGEIVLFADADDTYDFLESPALLAEMEKGAEFVIGSRLDGSIHKGAMPFLHRYLGTPVINWIINLLYSKKGNRVKDANS
GFRCFLKKKFLEWEIESTGMEFASEMLVKALRSGVKLSHVPISLYPDVEGRVPHLRTWRDGMRHLLQILIHSQQLFYYTG
LILFWIGWAFTILGYFTGIVAIGPFHIFGIHSLTVFLLVATFGQTIWAIGLFLAARKTPELSFYSRLNLLSEDLLFWYSA
RMILFVILLFAFILFRWWKNSFQVLDLEKEILMISFLSVQILNLIGQTITAHLLKRT
>Mature_377_residues
MKKKNVTYVIPCLNEEKTLPLVLEKLARLKKELKQYNVEILVSDNGSEDKSISIAKKYGAKVVHCEERGYGAALNFGIKN
ASGEIVLFADADDTYDFLESPALLAEMEKGAEFVIGSRLDGSIHKGAMPFLHRYLGTPVINWIINLLYSKKGNRVKDANS
GFRCFLKKKFLEWEIESTGMEFASEMLVKALRSGVKLSHVPISLYPDVEGRVPHLRTWRDGMRHLLQILIHSQQLFYYTG
LILFWIGWAFTILGYFTGIVAIGPFHIFGIHSLTVFLLVATFGQTIWAIGLFLAARKTPELSFYSRLNLLSEDLLFWYSA
RMILFVILLFAFILFRWWKNSFQVLDLEKEILMISFLSVQILNLIGQTITAHLLKRT

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 43085; Mature: 43085

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNVTYVIPCLNEEKTLPLVLEKLARLKKELKQYNVEILVSDNGSEDKSISIAKKYGA
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCC
KVVHCEERGYGAALNFGIKNASGEIVLFADADDTYDFLESPALLAEMEKGAEFVIGSRLD
EEEEECCCCCCEEEECCEECCCCCEEEEECCCCCHHHHCCCHHHHHHHCCCCEEECCCCC
GSIHKGAMPFLHRYLGTPVINWIINLLYSKKGNRVKDANSGFRCFLKKKFLEWEIESTGM
CCHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EFASEMLVKALRSGVKLSHVPISLYPDVEGRVPHLRTWRDGMRHLLQILIHSQQLFYYTG
HHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LILFWIGWAFTILGYFTGIVAIGPFHIFGIHSLTVFLLVATFGQTIWAIGLFLAARKTPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSFYSRLNLLSEDLLFWYSARMILFVILLFAFILFRWWKNSFQVLDLEKEILMISFLSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
ILNLIGQTITAHLLKRT
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKNVTYVIPCLNEEKTLPLVLEKLARLKKELKQYNVEILVSDNGSEDKSISIAKKYGA
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCC
KVVHCEERGYGAALNFGIKNASGEIVLFADADDTYDFLESPALLAEMEKGAEFVIGSRLD
EEEEECCCCCCEEEECCEECCCCCEEEEECCCCCHHHHCCCHHHHHHHCCCCEEECCCCC
GSIHKGAMPFLHRYLGTPVINWIINLLYSKKGNRVKDANSGFRCFLKKKFLEWEIESTGM
CCHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EFASEMLVKALRSGVKLSHVPISLYPDVEGRVPHLRTWRDGMRHLLQILIHSQQLFYYTG
HHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LILFWIGWAFTILGYFTGIVAIGPFHIFGIHSLTVFLLVATFGQTIWAIGLFLAARKTPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSFYSRLNLLSEDLLFWYSARMILFVILLFAFILFRWWKNSFQVLDLEKEILMISFLSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH
ILNLIGQTITAHLLKRT
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]