Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
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Accession | NC_008508 |
Length | 3,614,446 |
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The map label for this gene is 116328417
Identifier: 116328417
GI number: 116328417
Start: 2045511
End: 2047502
Strand: Direct
Name: 116328417
Synonym: LBL_1757
Alternate gene names: NA
Gene position: 2045511-2047502 (Clockwise)
Preceding gene: 116328416
Following gene: 116328418
Centisome position: 56.59
GC content: 38.65
Gene sequence:
>1992_bases ATGAGTCTACTTCTCAACTTAAAAACAGTTCCACTTATAGTACTTACTTTTTCTCTCGCTTTGCTGTTTTTTTTCGATCC TTCAAATCCCTCTCTTTCCAGAGATTCGGTGGTATTTAGTTTTTTTGTTTGGTTCGTTTCTTTAGGAATTTCGTTTCGGA AAAAGAAATTCAGAATTCATCCCCTTTTCCTATTGGCATGTTTATTATTAATCGGACTTTCCACGGTCAACGGAATTAAC CGGGCTCCGGTCGTCTACTTTTCCCAAAAGTTGAATTTAAAACTTCTCTATGTAGCGGCTTTGTGTCTTGCAATTTATTT ATTCCTTAAAAACATCCATCCGATTTTCCTATTCGTTCACACAGTTGCGTTTGCATGCTCCCCTCCTCTTTTTTCAAGTA TCAAATCGGTTCCGCTTTTACTCTTCGTAGCCGCTTCCTTGTTTTATCTTTCTCCGAAAAAAATTCGACTTCGTAAATTG TATGTCGTCGTTTCCATTTCCTTTTTTGTGCTACTGATTTCATCCTTACTTTCCTATAAATCCCAAGCGGCCCTCTTGCA ACTTTGTCTTTTATTTTCCGGAATTCTGATTTTCTTTTTGGTTTCTTCTTATCCAAGTCGGTTCATTAAAAAAGGGCTTC TTTTGATCCTTTCCTCAAATCTTCTTTTGAATACCATAAACTTGTTTTCCGCGATCCATACGATCTGGCCCTTTGATCTT TTGCAACCTTCTCTTTTGCTTACATACGCGGGTTTCCCCGTGTCGTCGATCGCGGTGATTTCCGCATTTTCCGCATTAGT CGCCTTTTATACTGCCTATCAGTATGGTCGATATTCCTGGTTTTTAATTCCAGGAGGTCTTATCGCTATTTATCTTACGT ATTTCAATCACTCGCGCGCAAGTTTATTGGCTTTTGGTCTCGCAACCCTTTGCATTTTTCTTTTTCGTTGGAGTAAAAAG AAAATTTTCTTCCGGATTTTCATTCCGTCATTCTGTCTAATAGTTCTACTCTCGGTCGGAAGCGTGTTTTTCTTTCCTCA AGAAGCCGTTTCCCAATATTTCGATCCAAAAACCCTTCTCATTCGATTTTCCCTGTGGAACTTTCACTTTCAATCGGTAC TTCAAAACGCTCCGATCTTCGGAATCGGACTGGATGCAGATTCTCTTTTGGCTCATCTGCCTGGAACACATTCACAAAAA ATCGGCTACGACGATTTCTATAAATTTCTGCATTCTTTCAGATCCTATCCGCAAGCTCATAATCTCTACGTGGAAACGTT TACGAGTCTCGGGATCTTAGGTTCCCTCTTTTTTCTTTGGATCGCCCTTTATCTTTTTCTTCTCTCCTACCGAATGTTAG TTTCCAAAAGTAAGAAGATTTCCGATATAGGGATATTCATTTCAGGAGTTCTTGTGTTTGTGGCTGTTCACGAGTTCTTC GATTACAATTTGGGAGAACAACATTTCTTCATTCCGGTAACGCTTGCATTATCTTTGATTCGGACCCGATCCAGTTCTAC GATGAGAACGTTCGGTCAAAACAGTTCGTTTAAAGCCGTTTACGCAATCTCATTGATTCTTTTAGGATATCTTTCTTTTC AGTTGGTCTGGGAACAAAGACTCAGAAATCTGATCATAATTTCCATTCAAGACGAAATAGAACTTGATAATTTCCTAATA TACAAAGAAAAAAAAGTTTCCGGGAACCGTAAAAAATTTTCTCATCCGATCGAAGAAATCACCAGCAATCAAATCTGGAT CCGTTCCGAGGAAAATTTAGTTTTGGCCTCCCTAATTCTTCGCAAAAGTCCGGGGCATTCGGATTTGATGGAATCCTTCT TAGATCGTTGTGTCCGAAAAAATCCGTATTCTTCCGTTTGTTGGAAAGAAAAAGTCGATGTTCTTAGAAAAAAAGATCCG AATTTAGATATCCGAAAAGAATTGGAAGAAGGAAAAAAAACGGATCCGTTTCATATCATTTTTACGGAATAA
Upstream 100 bases:
>100_bases ACGGCCTCCTCTTTCTTTCGGAAGAATCTTGATTGCTAAAATTGGGTAGCGAAGACACCCTGCATTTATTTATCATTTAC AAAACCAAATAAAACAATAA
Downstream 100 bases:
>100_bases ACAATAATGTTTAATCGATTGATTTTTTCTCCCTATTTTCGTTATTTCATCTACTTGTTCGCGGTATTATTCCTGATCTT CAATCGCTTCAAACTCGACG
Product: Lipid A core - O-antigen ligase
Products: NA
Alternate protein names: O-Antigen Polymerase-Like Protein
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
>663_residues MSLLLNLKTVPLIVLTFSLALLFFFDPSNPSLSRDSVVFSFFVWFVSLGISFRKKKFRIHPLFLLACLLLIGLSTVNGIN RAPVVYFSQKLNLKLLYVAALCLAIYLFLKNIHPIFLFVHTVAFACSPPLFSSIKSVPLLLFVAASLFYLSPKKIRLRKL YVVVSISFFVLLISSLLSYKSQAALLQLCLLFSGILIFFLVSSYPSRFIKKGLLLILSSNLLLNTINLFSAIHTIWPFDL LQPSLLLTYAGFPVSSIAVISAFSALVAFYTAYQYGRYSWFLIPGGLIAIYLTYFNHSRASLLAFGLATLCIFLFRWSKK KIFFRIFIPSFCLIVLLSVGSVFFFPQEAVSQYFDPKTLLIRFSLWNFHFQSVLQNAPIFGIGLDADSLLAHLPGTHSQK IGYDDFYKFLHSFRSYPQAHNLYVETFTSLGILGSLFFLWIALYLFLLSYRMLVSKSKKISDIGIFISGVLVFVAVHEFF DYNLGEQHFFIPVTLALSLIRTRSSSTMRTFGQNSSFKAVYAISLILLGYLSFQLVWEQRLRNLIIISIQDEIELDNFLI YKEKKVSGNRKKFSHPIEEITSNQIWIRSEENLVLASLILRKSPGHSDLMESFLDRCVRKNPYSSVCWKEKVDVLRKKDP NLDIRKELEEGKKTDPFHIIFTE
Sequences:
>Translated_663_residues MSLLLNLKTVPLIVLTFSLALLFFFDPSNPSLSRDSVVFSFFVWFVSLGISFRKKKFRIHPLFLLACLLLIGLSTVNGIN RAPVVYFSQKLNLKLLYVAALCLAIYLFLKNIHPIFLFVHTVAFACSPPLFSSIKSVPLLLFVAASLFYLSPKKIRLRKL YVVVSISFFVLLISSLLSYKSQAALLQLCLLFSGILIFFLVSSYPSRFIKKGLLLILSSNLLLNTINLFSAIHTIWPFDL LQPSLLLTYAGFPVSSIAVISAFSALVAFYTAYQYGRYSWFLIPGGLIAIYLTYFNHSRASLLAFGLATLCIFLFRWSKK KIFFRIFIPSFCLIVLLSVGSVFFFPQEAVSQYFDPKTLLIRFSLWNFHFQSVLQNAPIFGIGLDADSLLAHLPGTHSQK IGYDDFYKFLHSFRSYPQAHNLYVETFTSLGILGSLFFLWIALYLFLLSYRMLVSKSKKISDIGIFISGVLVFVAVHEFF DYNLGEQHFFIPVTLALSLIRTRSSSTMRTFGQNSSFKAVYAISLILLGYLSFQLVWEQRLRNLIIISIQDEIELDNFLI YKEKKVSGNRKKFSHPIEEITSNQIWIRSEENLVLASLILRKSPGHSDLMESFLDRCVRKNPYSSVCWKEKVDVLRKKDP NLDIRKELEEGKKTDPFHIIFTE >Mature_662_residues SLLLNLKTVPLIVLTFSLALLFFFDPSNPSLSRDSVVFSFFVWFVSLGISFRKKKFRIHPLFLLACLLLIGLSTVNGINR APVVYFSQKLNLKLLYVAALCLAIYLFLKNIHPIFLFVHTVAFACSPPLFSSIKSVPLLLFVAASLFYLSPKKIRLRKLY VVVSISFFVLLISSLLSYKSQAALLQLCLLFSGILIFFLVSSYPSRFIKKGLLLILSSNLLLNTINLFSAIHTIWPFDLL QPSLLLTYAGFPVSSIAVISAFSALVAFYTAYQYGRYSWFLIPGGLIAIYLTYFNHSRASLLAFGLATLCIFLFRWSKKK IFFRIFIPSFCLIVLLSVGSVFFFPQEAVSQYFDPKTLLIRFSLWNFHFQSVLQNAPIFGIGLDADSLLAHLPGTHSQKI GYDDFYKFLHSFRSYPQAHNLYVETFTSLGILGSLFFLWIALYLFLLSYRMLVSKSKKISDIGIFISGVLVFVAVHEFFD YNLGEQHFFIPVTLALSLIRTRSSSTMRTFGQNSSFKAVYAISLILLGYLSFQLVWEQRLRNLIIISIQDEIELDNFLIY KEKKVSGNRKKFSHPIEEITSNQIWIRSEENLVLASLILRKSPGHSDLMESFLDRCVRKNPYSSVCWKEKVDVLRKKDPN LDIRKELEEGKKTDPFHIIFTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75888; Mature: 75757
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLLNLKTVPLIVLTFSLALLFFFDPSNPSLSRDSVVFSFFVWFVSLGISFRKKKFRIH CCEEEECHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHEEEC PLFLLACLLLIGLSTVNGINRAPVVYFSQKLNLKLLYVAALCLAIYLFLKNIHPIFLFVH HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH TVAFACSPPLFSSIKSVPLLLFVAASLFYLSPKKIRLRKLYVVVSISFFVLLISSLLSYK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAALLQLCLLFSGILIFFLVSSYPSRFIKKGLLLILSSNLLLNTINLFSAIHTIWPFDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCHHH LQPSLLLTYAGFPVSSIAVISAFSALVAFYTAYQYGRYSWFLIPGGLIAIYLTYFNHSRA HCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCHH SLLAFGLATLCIFLFRWSKKKIFFRIFIPSFCLIVLLSVGSVFFFPQEAVSQYFDPKTLL HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCEEE IRFSLWNFHFQSVLQNAPIFGIGLDADSLLAHLPGTHSQKIGYDDFYKFLHSFRSYPQAH EEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC NLYVETFTSLGILGSLFFLWIALYLFLLSYRMLVSKSKKISDIGIFISGVLVFVAVHEFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DYNLGEQHFFIPVTLALSLIRTRSSSTMRTFGQNSSFKAVYAISLILLGYLSFQLVWEQR CCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRNLIIISIQDEIELDNFLIYKEKKVSGNRKKFSHPIEEITSNQIWIRSEENLVLASLIL HCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHCCCHHHHCCCCEEEECCCCCHHHHHHH RKSPGHSDLMESFLDRCVRKNPYSSVCWKEKVDVLRKKDPNLDIRKELEEGKKTDPFHII HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEE FTE EEC >Mature Secondary Structure SLLLNLKTVPLIVLTFSLALLFFFDPSNPSLSRDSVVFSFFVWFVSLGISFRKKKFRIH CEEEECHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHEEEC PLFLLACLLLIGLSTVNGINRAPVVYFSQKLNLKLLYVAALCLAIYLFLKNIHPIFLFVH HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH TVAFACSPPLFSSIKSVPLLLFVAASLFYLSPKKIRLRKLYVVVSISFFVLLISSLLSYK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAALLQLCLLFSGILIFFLVSSYPSRFIKKGLLLILSSNLLLNTINLFSAIHTIWPFDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCHHH LQPSLLLTYAGFPVSSIAVISAFSALVAFYTAYQYGRYSWFLIPGGLIAIYLTYFNHSRA HCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCHH SLLAFGLATLCIFLFRWSKKKIFFRIFIPSFCLIVLLSVGSVFFFPQEAVSQYFDPKTLL HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCEEE IRFSLWNFHFQSVLQNAPIFGIGLDADSLLAHLPGTHSQKIGYDDFYKFLHSFRSYPQAH EEEHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC NLYVETFTSLGILGSLFFLWIALYLFLLSYRMLVSKSKKISDIGIFISGVLVFVAVHEFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DYNLGEQHFFIPVTLALSLIRTRSSSTMRTFGQNSSFKAVYAISLILLGYLSFQLVWEQR CCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRNLIIISIQDEIELDNFLIYKEKKVSGNRKKFSHPIEEITSNQIWIRSEENLVLASLIL HCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHCCCHHHHCCCCEEEECCCCCHHHHHHH RKSPGHSDLMESFLDRCVRKNPYSSVCWKEKVDVLRKKDPNLDIRKELEEGKKTDPFHII HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEE FTE EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA