Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
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Accession | NC_008508 |
Length | 3,614,446 |
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The map label for this gene is 116328415
Identifier: 116328415
GI number: 116328415
Start: 2042175
End: 2043338
Strand: Direct
Name: 116328415
Synonym: LBL_1755
Alternate gene names: NA
Gene position: 2042175-2043338 (Clockwise)
Preceding gene: 116328411
Following gene: 116328416
Centisome position: 56.5
GC content: 40.98
Gene sequence:
>1164_bases ATGGAAACGATTCAGAGAAAAAAAAGAGAGAAGGAAACAATCTCCGACCCCACTAAAAAGTTTCACATTATCTCGAAATT TCTCGTACAAACAGATATCATCGCGCGTGTTCCGGGCTCCACAATTCAGATCATTAAAATCCTACAAGTTTCTAAAGACG CCACAAAAATCCTGATTCAAACGGAAATACCAAATGCATTTCCGTTAAACAGTCATATCACCCTTACAAAACTTCTTGCA AAATACGTGGAGCTCAATTGCGAAGTTATAGACGAAAGACCGAACAACCAATTGATTCTTTCCGTTTCGGATATTTCGAT TGCAAGTAAAGAAAGAAGTCTCAGCCGAATCTCGCCTCCCGAAGGAGCCGTTTGGATTACGAACATCCGTACGAGCAGAA CTACAATCGACGCGAATCTTTTTAACATTCCCACCTCCGTAAAGGTAAACTTTGCGGACTACGAAACGAAACTAAAATCA AAGTACGACTTCCTAAAGATCGACGTGTTCGGAACGATCGGGGACAAGTTAGATCTCGTCAAAAAAACACGTAAAATTCT TTTCATTCCGAATACTCAAAAGGAAGAAAGTTATGCGGCCTATGATCAGGAAGGTTTTATCGACTACGCTTCCGAACTAG GGGACTCGGAAGACATTCGTAAAAAAATCATAGAATACGCAAATCAAAAGATCAAGTCCGAACTGATCGTTCCCGTTATT TATTTAAGTCACGAGGAACAGGCAATCCCAATCGGATTCGTTCACGCCCAAAATCGAAACAGAGAAATCGACATTTTGGA AGTGATGGAAATCAAAACCCTCACTTTCGAAATGGTGGATCGAATCCGAGAATCCAACACAATCTTAGTGAAAGAAAGAT TTCCGATTGTGAATATTTCCACGGGAGGTCTAAAGGTTAAAATCAATCACCCGGACTTAAATCAAGATCTTACAAAAAGG GCAGGATTTACGTTTGATATCTTTTTTAGGATGCAGGCTCCTCTCACCGCTTTTGGACTCATTCGTTCCATTACCAAAGA TGTGGAGGGAAATCTTTACGTAGGCCTTTCGATCGAAGGTAATTCCTCAAGGCCGGGGGAAAGAAAAAAATATATAGATA ACGTCAACCGACTTCTCGCGGAAAGCGGCCAAATTCAACCCTGA
Upstream 100 bases:
>100_bases TTCGGAGTCGCGGTAAGTTTGGTTTGACATTACCTAGTACATAAAAGGTAAACTGAGAACTAAGATCAAGAGAATTTCCC CTCGTTCGCTTTGAAAAACT
Downstream 100 bases:
>100_bases TTTCGGATTAAAATCCGGCATCCAAAACATTCAAGAGCTTGAATATATCTAAATAATACGTTTTTATAGGTCGTAAACAG AGTCATTACATTCAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues METIQRKKREKETISDPTKKFHIISKFLVQTDIIARVPGSTIQIIKILQVSKDATKILIQTEIPNAFPLNSHITLTKLLA KYVELNCEVIDERPNNQLILSVSDISIASKERSLSRISPPEGAVWITNIRTSRTTIDANLFNIPTSVKVNFADYETKLKS KYDFLKIDVFGTIGDKLDLVKKTRKILFIPNTQKEESYAAYDQEGFIDYASELGDSEDIRKKIIEYANQKIKSELIVPVI YLSHEEQAIPIGFVHAQNRNREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNISTGGLKVKINHPDLNQDLTKR AGFTFDIFFRMQAPLTAFGLIRSITKDVEGNLYVGLSIEGNSSRPGERKKYIDNVNRLLAESGQIQP
Sequences:
>Translated_387_residues METIQRKKREKETISDPTKKFHIISKFLVQTDIIARVPGSTIQIIKILQVSKDATKILIQTEIPNAFPLNSHITLTKLLA KYVELNCEVIDERPNNQLILSVSDISIASKERSLSRISPPEGAVWITNIRTSRTTIDANLFNIPTSVKVNFADYETKLKS KYDFLKIDVFGTIGDKLDLVKKTRKILFIPNTQKEESYAAYDQEGFIDYASELGDSEDIRKKIIEYANQKIKSELIVPVI YLSHEEQAIPIGFVHAQNRNREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNISTGGLKVKINHPDLNQDLTKR AGFTFDIFFRMQAPLTAFGLIRSITKDVEGNLYVGLSIEGNSSRPGERKKYIDNVNRLLAESGQIQP >Mature_387_residues METIQRKKREKETISDPTKKFHIISKFLVQTDIIARVPGSTIQIIKILQVSKDATKILIQTEIPNAFPLNSHITLTKLLA KYVELNCEVIDERPNNQLILSVSDISIASKERSLSRISPPEGAVWITNIRTSRTTIDANLFNIPTSVKVNFADYETKLKS KYDFLKIDVFGTIGDKLDLVKKTRKILFIPNTQKEESYAAYDQEGFIDYASELGDSEDIRKKIIEYANQKIKSELIVPVI YLSHEEQAIPIGFVHAQNRNREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNISTGGLKVKINHPDLNQDLTKR AGFTFDIFFRMQAPLTAFGLIRSITKDVEGNLYVGLSIEGNSSRPGERKKYIDNVNRLLAESGQIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44070; Mature: 44070
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIQRKKREKETISDPTKKFHIISKFLVQTDIIARVPGSTIQIIKILQVSKDATKILIQ CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCEEEEEE TEIPNAFPLNSHITLTKLLAKYVELNCEVIDERPNNQLILSVSDISIASKERSLSRISPP ECCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCEECHHHHHHHHCCCC EGAVWITNIRTSRTTIDANLFNIPTSVKVNFADYETKLKSKYDFLKIDVFGTIGDKLDLV CCCEEEEEEECCCEEEECEEEECCCEEEEEEHHHHHHHHCCCCEEEEEEEECCCCHHHHH KKTRKILFIPNTQKEESYAAYDQEGFIDYASELGDSEDIRKKIIEYANQKIKSELIVPVI HHCCEEEECCCCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEEE YLSHEEQAIPIGFVHAQNRNREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNIS EECCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEE TGGLKVKINHPDLNQDLTKRAGFTFDIFFRMQAPLTAFGLIRSITKDVEGNLYVGLSIEG CCCEEEEEECCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEC NSSRPGERKKYIDNVNRLLAESGQIQP CCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure METIQRKKREKETISDPTKKFHIISKFLVQTDIIARVPGSTIQIIKILQVSKDATKILIQ CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCEEEEEE TEIPNAFPLNSHITLTKLLAKYVELNCEVIDERPNNQLILSVSDISIASKERSLSRISPP ECCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCEECHHHHHHHHCCCC EGAVWITNIRTSRTTIDANLFNIPTSVKVNFADYETKLKSKYDFLKIDVFGTIGDKLDLV CCCEEEEEEECCCEEEECEEEECCCEEEEEEHHHHHHHHCCCCEEEEEEEECCCCHHHHH KKTRKILFIPNTQKEESYAAYDQEGFIDYASELGDSEDIRKKIIEYANQKIKSELIVPVI HHCCEEEECCCCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEEE YLSHEEQAIPIGFVHAQNRNREIDILEVMEIKTLTFEMVDRIRESNTILVKERFPIVNIS EECCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEE TGGLKVKINHPDLNQDLTKRAGFTFDIFFRMQAPLTAFGLIRSITKDVEGNLYVGLSIEG CCCEEEEEECCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEC NSSRPGERKKYIDNVNRLLAESGQIQP CCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA