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The map label for this gene is ssb [H]

Identifier: 116327957

GI number: 116327957

Start: 1468065

End: 1468514

Strand: Direct

Name: ssb [H]

Synonym: LBL_1246

Alternate gene names: 116327957

Gene position: 1468065-1468514 (Clockwise)

Preceding gene: 116327956

Following gene: 116327958

Centisome position: 40.62

GC content: 44.44

Gene sequence:

>450_bases
ATGGCTAATGATATCAATAGAGTGACTCTGGTTGGTCGTTTAACACGGGACCCGGAGTTCAAATCGATCAATGGTACTTC
TCTTGTAAATTTCTCTCTGGCCAATGGTAGGACCTATGTGTCTAACGGAGAAAAAAGAGAGGAGTCTCATTTTTTCGATT
GTGAGGTCTGGGGAAAACCGGCCGATATCATTCAACAGTATTGCAAAAAGGGAAAACAGATTGCCATTGAAGGAAGATTA
AAGCAGGACACATGGGAAACACCGGAAGGTAAAAAAGCGTCTCGAATTCGTATCGTCGTGGAGAATTTTCAACTTTTAGG
CTCTAAAGACGATTCTAATTCGATGAGCGGATCTTCTTCCGGCGGATCTTCGACATTCGGAGGGAATTCGTCCTCTCCGG
AATCTTATAACCCTCCTGCACCGGACGGAGACGACGACATACCGTTTTAA

Upstream 100 bases:

>100_bases
CATCATTACAAATGTAGCGCCGAGCCGAGTGCCATTGAAAAAGTGGAAAAAGAATTTTTAATCAATCAGAACATCCTTCG
TTCCATGGTCGTTCGCCTCG

Downstream 100 bases:

>100_bases
TGAGGTACATTTATGAGCGAGAATGAAATCAAAGAAGAACGTTCCGAGAGACCGGAACAAGGCGATGCTTCCGTCGAAAT
GGAAGGCAAGCCGCAAAGAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MANDINRVTLVGRLTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKPADIIQQYCKKGKQIAIEGRL
KQDTWETPEGKKASRIRIVVENFQLLGSKDDSNSMSGSSSGGSSTFGGNSSSPESYNPPAPDGDDDIPF

Sequences:

>Translated_149_residues
MANDINRVTLVGRLTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKPADIIQQYCKKGKQIAIEGRL
KQDTWETPEGKKASRIRIVVENFQLLGSKDDSNSMSGSSSGGSSTFGGNSSSPESYNPPAPDGDDDIPF
>Mature_148_residues
ANDINRVTLVGRLTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKPADIIQQYCKKGKQIAIEGRLK
QDTWETPEGKKASRIRIVVENFQLLGSKDDSNSMSGSSSGGSSTFGGNSSSPESYNPPAPDGDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=173, Percent_Identity=30.0578034682081, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16312; Mature: 16181

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDINRVTLVGRLTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKP
CCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEECCCC
ADIIQQYCKKGKQIAIEGRLKQDTWETPEGKKASRIRIVVENFQLLGSKDDSNSMSGSSS
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCCCCCCCCC
GGSSTFGGNSSSPESYNPPAPDGDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANDINRVTLVGRLTRDPEFKSINGTSLVNFSLANGRTYVSNGEKREESHFFDCEVWGKP
CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEECCCC
ADIIQQYCKKGKQIAIEGRLKQDTWETPEGKKASRIRIVVENFQLLGSKDDSNSMSGSSS
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCCCCCCCCC
GGSSTFGGNSSSPESYNPPAPDGDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]