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The map label for this gene is sdcS [H]

Identifier: 116327953

GI number: 116327953

Start: 1460606

End: 1462000

Strand: Direct

Name: sdcS [H]

Synonym: LBL_1242

Alternate gene names: 116327953

Gene position: 1460606-1462000 (Clockwise)

Preceding gene: 116327952

Following gene: 116327955

Centisome position: 40.41

GC content: 40.57

Gene sequence:

>1395_bases
ATGAAGCGCGACTTAATTTTAATTATTGGAACTTTGCTTTTAATTGGAATTTTATTTTTCGTTCAGGTTCTTTTTGAATT
TCCTTTAAGTGTTGCCATTATGATTTGTATTTTCGTTTTGGCCGCTGTTTTTTGGGTGGCCGAACCGATTCCCGGATACG
CGACTTTGATTCTCGTGATTTTTTTGGAAATTATCTTTTTTGCGAATCCTATTGGCATTCCGGGTTTTGTATTTCCTCAA
AATAAAAATCCATCTGCTGCAGTCTTTCTTTCTTCTTTGGCGGATTCTTCGATTATACTGTTCTTGGGCGGTTTTGTATT
GGCAAAAGCTTGCGTAAAAACGGGTTTGGATCGTTTTTTTGCCAATCGAATCATTCGCAAATTCGGGGTAAAGAGTCATC
AGGTGCTTCTCGGTTTTATGTTCACAACCGGATTTATATCAATGTGGATGAGCAATACGGCGACCACTTCTATGATGATT
GCCCTTTCTTTTCCCTTATTACGGGTTTTACCGGAAAAGGAACCCTTTCGAAAAGCATTGATACTGGGAATTCCATTTGC
GGCGAACATAGGAGGAGTGGGAACCCCGATTGGATCTCCTCCGAATATCATAGCGATGGGAATTCTTAGGCAACAAGGTA
TTGTCATTCCCTTCGGAACTTGGATGTTTTTTGCGGTTCCTCTTGTCGTCGTTTTAATTTTATTTGCTTGGATACTTCTT
ATGAAATTGTTTCCGCAGAAGGATTCCTTGGACTTAGTGGTGGAGTTTCAAGAACCGGAAAGGGGAATGAAATCCTTTTC
GTTCCGAGTTACTTCGATGATTTTTTTGGGAACAGTTGTCCTTTGGTTTACCGAAAATTTGCACGGAGTTCCAGCGGGAG
TTGTTGCACTTCTTCCTTTGATTTTATTTCCGATGTTCGGAATTTTGAACGAGAAGGATATAAACTCCTTGGATTGGTCC
GTTTTAATTCTGATCTCGGGTGGAATCGGTATCGGAGTAGGTTTTCAGCAGAGCGGAATGGGACCCTGGTTTTCGGGAAT
CCTAAAGCATATTGCTAAACCGGAATATGCAATAAGTGTATTATTCTTTCTTTGTGTTCTAACTCTTTTGTTGAGCACTT
TTATGTCGAACACCGCTGCGACAAATCTTCTGGTTCCATTTGCGTTTCCGTTTTCTGCGATACTTTTTCCAGGATCAAAT
GTGTATCTTTTGGAAGTATGTTTAGGAATTGCTCTTAGTGCTTCTCTGGCTATGTCTCTCCCTGTAAGCACTCCTCCAAA
TGCGATTGCATATTCGGTCGGGGGGATTGAAATCAAGGATATGATTTGTGCTGGTTTGCCGATCGGGATTTTTGGTTTGA
TTGTCGTTTTGTCCAGCTATTTTGCGTTTTTTTAA

Upstream 100 bases:

>100_bases
TAAACTTTTTATTGTTTCCGCGTATCGATTTTTTATGAAATTCGGCTGGAAGATTATTTAGAACATTATAAAATTCTATT
TTTATATTTTAAACACCCGA

Downstream 100 bases:

>100_bases
TTTGCTCCACACCTCCTAGCTCCACTTGGTGGATCTTTTCCACAATCGATTGTAGATTCTATTTTACTCATCCCTATAAA
AATAAGCGCCTAAATGTCAA

Product: Sodium:sulfate symporter

Products: NA

Alternate protein names: Na(+)/dicarboxylate symporter [H]

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MKRDLILIIGTLLLIGILFFVQVLFEFPLSVAIMICIFVLAAVFWVAEPIPGYATLILVIFLEIIFFANPIGIPGFVFPQ
NKNPSAAVFLSSLADSSIILFLGGFVLAKACVKTGLDRFFANRIIRKFGVKSHQVLLGFMFTTGFISMWMSNTATTSMMI
ALSFPLLRVLPEKEPFRKALILGIPFAANIGGVGTPIGSPPNIIAMGILRQQGIVIPFGTWMFFAVPLVVVLILFAWILL
MKLFPQKDSLDLVVEFQEPERGMKSFSFRVTSMIFLGTVVLWFTENLHGVPAGVVALLPLILFPMFGILNEKDINSLDWS
VLILISGGIGIGVGFQQSGMGPWFSGILKHIAKPEYAISVLFFLCVLTLLLSTFMSNTAATNLLVPFAFPFSAILFPGSN
VYLLEVCLGIALSASLAMSLPVSTPPNAIAYSVGGIEIKDMICAGLPIGIFGLIVVLSSYFAFF

Sequences:

>Translated_464_residues
MKRDLILIIGTLLLIGILFFVQVLFEFPLSVAIMICIFVLAAVFWVAEPIPGYATLILVIFLEIIFFANPIGIPGFVFPQ
NKNPSAAVFLSSLADSSIILFLGGFVLAKACVKTGLDRFFANRIIRKFGVKSHQVLLGFMFTTGFISMWMSNTATTSMMI
ALSFPLLRVLPEKEPFRKALILGIPFAANIGGVGTPIGSPPNIIAMGILRQQGIVIPFGTWMFFAVPLVVVLILFAWILL
MKLFPQKDSLDLVVEFQEPERGMKSFSFRVTSMIFLGTVVLWFTENLHGVPAGVVALLPLILFPMFGILNEKDINSLDWS
VLILISGGIGIGVGFQQSGMGPWFSGILKHIAKPEYAISVLFFLCVLTLLLSTFMSNTAATNLLVPFAFPFSAILFPGSN
VYLLEVCLGIALSASLAMSLPVSTPPNAIAYSVGGIEIKDMICAGLPIGIFGLIVVLSSYFAFF
>Mature_464_residues
MKRDLILIIGTLLLIGILFFVQVLFEFPLSVAIMICIFVLAAVFWVAEPIPGYATLILVIFLEIIFFANPIGIPGFVFPQ
NKNPSAAVFLSSLADSSIILFLGGFVLAKACVKTGLDRFFANRIIRKFGVKSHQVLLGFMFTTGFISMWMSNTATTSMMI
ALSFPLLRVLPEKEPFRKALILGIPFAANIGGVGTPIGSPPNIIAMGILRQQGIVIPFGTWMFFAVPLVVVLILFAWILL
MKLFPQKDSLDLVVEFQEPERGMKSFSFRVTSMIFLGTVVLWFTENLHGVPAGVVALLPLILFPMFGILNEKDINSLDWS
VLILISGGIGIGVGFQQSGMGPWFSGILKHIAKPEYAISVLFFLCVLTLLLSTFMSNTAATNLLVPFAFPFSAILFPGSN
VYLLEVCLGIALSASLAMSLPVSTPPNAIAYSVGGIEIKDMICAGLPIGIFGLIVVLSSYFAFF

Specific function: Mediates the transport of dicarboxylates across the cytoplasmic membrane via a Na(+)-electrochemical gradient [H]

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Homo sapiens, GI4506979, Length=533, Percent_Identity=26.4540337711069, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI225637549, Length=487, Percent_Identity=26.694045174538, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI225637552, Length=486, Percent_Identity=26.7489711934156, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI29171306, Length=522, Percent_Identity=25.6704980842912, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI31795546, Length=338, Percent_Identity=27.5147928994083, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI301069349, Length=319, Percent_Identity=26.0188087774295, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI31377715, Length=343, Percent_Identity=25.0728862973761, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI58761541, Length=343, Percent_Identity=25.0728862973761, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI301069353, Length=343, Percent_Identity=25.0728862973761, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI219802232, Length=451, Percent_Identity=23.9467849223947, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI19923838, Length=337, Percent_Identity=24.9258160237389, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI301069346, Length=167, Percent_Identity=32.9341317365269, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71989118, Length=509, Percent_Identity=25.147347740668, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71988385, Length=495, Percent_Identity=26.0606060606061, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI32565804, Length=423, Percent_Identity=25.7683215130024, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI32564681, Length=495, Percent_Identity=24.6464646464646, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17551790, Length=568, Percent_Identity=22.0070422535211, Blast_Score=91, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324340, Length=401, Percent_Identity=30.6733167082294, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6322263, Length=436, Percent_Identity=30.5045871559633, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6319885, Length=458, Percent_Identity=28.1659388646288, Blast_Score=129, Evalue=9e-31,
Organism=Drosophila melanogaster, GI281366409, Length=522, Percent_Identity=24.5210727969349, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17737623, Length=522, Percent_Identity=24.5210727969349, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24666468, Length=522, Percent_Identity=24.5210727969349, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI45551633, Length=522, Percent_Identity=24.5210727969349, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281362116, Length=494, Percent_Identity=24.4939271255061, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281362114, Length=493, Percent_Identity=24.5436105476673, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281362112, Length=493, Percent_Identity=24.5436105476673, Blast_Score=96, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 50464; Mature: 50464

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCEEEECCCEEHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CCCCCCCCEEEECCCEEHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA