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The map label for this gene is yfnD [H]

Identifier: 116327940

GI number: 116327940

Start: 1445538

End: 1446551

Strand: Direct

Name: yfnD [H]

Synonym: LBL_1229

Alternate gene names: 116327940

Gene position: 1445538-1446551 (Clockwise)

Preceding gene: 116327939

Following gene: 116327941

Centisome position: 39.99

GC content: 34.62

Gene sequence:

>1014_bases
ATGAAGTATCTTTGTACACTTTTTGATTTTAATTATCTACCTTTGGGATTATCTCTGTACGAATCTGTTCGGCGCCATTT
CGGAGATTTCCATCTTTGGGTGCTTGCAATGGACGACAAAACTTATACTTTTTTTAAGGAGAATTCATTTGATCATGTCA
CAATACTTTCATTAGGTGATATTGAGTCCGAGGACGTTCTTGTTGCAAAAGGGAATCGGACTTGGCAGGAATATTGTTGG
ACTCTTTCTCCGGTTTTGCCTACTTATATTTTAGAAGAAAATCCAAATATAGATCACGTTACTTATTTGGATTCCGACAT
ATATTTTTTTTCTGATGTGAGTCCGATTTACGATGAAATCGGAGAACATTCCATAATGATCATACCACATCGTTTTCCGG
ATCGTCTAAAACATCTCGAAGCTAACGGAATTTACAATGTGCAAATGGTATATTTTAAACGGGACAAGATAGGAATAACA
TGTCTCAGCCGTTGGAGAGAGCAGTGTTTGGAGTGGTGTTATAACCGAGTAGAAGACGGTCGTTTGGGAGATCAAAAATA
TTTGGACGTATGGCCGCAAACTTATAAAAACATATGTGTATTAAAAAATGAACAAGCCGGTGTTGCGCTTTGGAACGCTG
AAAAATACAAGATTCGATTGAAAGACGAAAAAATTTTGATCAATGAAAACCCTCTCATATTTTATCATTTTCATATGTTT
AAATTCTACGAGGGAAACATCTATGGGACTGGAATTTCCGATTATAAATTGAATTACAAGGTGTTAAAGGTTATTTATGA
TGTTTATGTGGAACAATTGATCGATGTGGTTTCCCGTTTTAATCTGAAATTAAGAAGTTTGAATATTTGGGAAATGTGTA
TCATGATGGAGAAAGAGAATTTTTATTCTTACTCCACTTTGAATGGAATTTTTTGGAATGTTCTGCTTTGTAGTTTGGTG
ATTTTAAAAAAGATCCTGAGGAGCAGTCAAAGTTTTCTTTTAAGTAAGAAATGA

Upstream 100 bases:

>100_bases
TAGTTTTCTGCTGTGTCAGAAAGATCAAGCTGCAAGGTTCTGTTCCAAAATTGGGACAGAACCTTATATCGAACTCACGT
TAATTGAAAAAAATCCAACA

Downstream 100 bases:

>100_bases
TTCGAAACCTATTTTAAATTTTAAAAATCAATTGTAATCAATAAACTGTAGAGCTACTTCAAGAATTACTTAGAGTTTGT
CCTACTGATCTCTATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKYLCTLFDFNYLPLGLSLYESVRRHFGDFHLWVLAMDDKTYTFFKENSFDHVTILSLGDIESEDVLVAKGNRTWQEYCW
TLSPVLPTYILEENPNIDHVTYLDSDIYFFSDVSPIYDEIGEHSIMIIPHRFPDRLKHLEANGIYNVQMVYFKRDKIGIT
CLSRWREQCLEWCYNRVEDGRLGDQKYLDVWPQTYKNICVLKNEQAGVALWNAEKYKIRLKDEKILINENPLIFYHFHMF
KFYEGNIYGTGISDYKLNYKVLKVIYDVYVEQLIDVVSRFNLKLRSLNIWEMCIMMEKENFYSYSTLNGIFWNVLLCSLV
ILKKILRSSQSFLLSKK

Sequences:

>Translated_337_residues
MKYLCTLFDFNYLPLGLSLYESVRRHFGDFHLWVLAMDDKTYTFFKENSFDHVTILSLGDIESEDVLVAKGNRTWQEYCW
TLSPVLPTYILEENPNIDHVTYLDSDIYFFSDVSPIYDEIGEHSIMIIPHRFPDRLKHLEANGIYNVQMVYFKRDKIGIT
CLSRWREQCLEWCYNRVEDGRLGDQKYLDVWPQTYKNICVLKNEQAGVALWNAEKYKIRLKDEKILINENPLIFYHFHMF
KFYEGNIYGTGISDYKLNYKVLKVIYDVYVEQLIDVVSRFNLKLRSLNIWEMCIMMEKENFYSYSTLNGIFWNVLLCSLV
ILKKILRSSQSFLLSKK
>Mature_337_residues
MKYLCTLFDFNYLPLGLSLYESVRRHFGDFHLWVLAMDDKTYTFFKENSFDHVTILSLGDIESEDVLVAKGNRTWQEYCW
TLSPVLPTYILEENPNIDHVTYLDSDIYFFSDVSPIYDEIGEHSIMIIPHRFPDRLKHLEANGIYNVQMVYFKRDKIGIT
CLSRWREQCLEWCYNRVEDGRLGDQKYLDVWPQTYKNICVLKNEQAGVALWNAEKYKIRLKDEKILINENPLIFYHFHMF
KFYEGNIYGTGISDYKLNYKVLKVIYDVYVEQLIDVVSRFNLKLRSLNIWEMCIMMEKENFYSYSTLNGIFWNVLLCSLV
ILKKILRSSQSFLLSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 40247; Mature: 40247

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLCTLFDFNYLPLGLSLYESVRRHFGDFHLWVLAMDDKTYTFFKENSFDHVTILSLGD
CCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCEEEEEEECC
IESEDVLVAKGNRTWQEYCWTLSPVLPTYILEENPNIDHVTYLDSDIYFFSDVSPIYDEI
CCCCCEEEECCCCCHHHHHHHHCCHHCEEEECCCCCCCEEEEECCCEEEECCCCHHHHHC
GEHSIMIIPHRFPDRLKHLEANGIYNVQMVYFKRDKIGITCLSRWREQCLEWCYNRVEDG
CCCEEEEEECCCCHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
RLGDQKYLDVWPQTYKNICVLKNEQAGVALWNAEKYKIRLKDEKILINENPLIFYHFHMF
CCCCCHHHHCCCHHHCCEEEEECCCCCEEEEECCEEEEEEECCEEEEECCCEEEEEEEEE
KFYEGNIYGTGISDYKLNYKVLKVIYDVYVEQLIDVVSRFNLKLRSLNIWEMCIMMEKEN
EEEECEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEEEEECCC
FYSYSTLNGIFWNVLLCSLVILKKILRSSQSFLLSKK
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MKYLCTLFDFNYLPLGLSLYESVRRHFGDFHLWVLAMDDKTYTFFKENSFDHVTILSLGD
CCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCEEEEEECCCCCEEEEEEECC
IESEDVLVAKGNRTWQEYCWTLSPVLPTYILEENPNIDHVTYLDSDIYFFSDVSPIYDEI
CCCCCEEEECCCCCHHHHHHHHCCHHCEEEECCCCCCCEEEEECCCEEEECCCCHHHHHC
GEHSIMIIPHRFPDRLKHLEANGIYNVQMVYFKRDKIGITCLSRWREQCLEWCYNRVEDG
CCCEEEEEECCCCHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
RLGDQKYLDVWPQTYKNICVLKNEQAGVALWNAEKYKIRLKDEKILINENPLIFYHFHMF
CCCCCHHHHCCCHHHCCEEEEECCCCCEEEEECCEEEEEEECCEEEEECCCEEEEEEEEE
KFYEGNIYGTGISDYKLNYKVLKVIYDVYVEQLIDVVSRFNLKLRSLNIWEMCIMMEKEN
EEEECEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEEEEECCC
FYSYSTLNGIFWNVLLCSLVILKKILRSSQSFLLSKK
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]