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The map label for this gene is ycjS [H]

Identifier: 116327913

GI number: 116327913

Start: 1413664

End: 1414692

Strand: Direct

Name: ycjS [H]

Synonym: LBL_1199

Alternate gene names: 116327913

Gene position: 1413664-1414692 (Clockwise)

Preceding gene: 116327912

Following gene: 116327914

Centisome position: 39.11

GC content: 37.51

Gene sequence:

>1029_bases
ATGAAGAAGCTTAAAGTTGGAATTGCAGGATATGGGGTCGTAGGAAAACGCAGACATCAATATATCAAACAAAACCCTAA
TTTAATGGTTACCGCAATTTGCGATAAGAGTTTACAGGATGAAAGGAACGCATTTGACAATTTAAATATATATCAAAAAT
TCCAAGATTTAATTCAAAAAGAAGAGTTAGATATATTACTTGTCTGTTTGACCAATGATGTGGCAGCAGAGGCTACGATT
CTTGGCTTAAAAAATGGGCTTCATGTTTTTTGTGAAAAACCACCCGGTAGAAATGTTCAAGAAATAAGCGAAGTTCGTGA
AGTTGAAAGACAGTTCCCGACTCTAAAATTAAAATATGGGTTCAATCATCGATATCATGATTCCATTCGAGAGGCCTTAA
AAATTGTCTCTTCCGGTAAGATGGGAAAAGTTGTCAACATTCGCGGGATCTATGGAAAATCTGCCATTGTCAATGTTGCT
GACGGTTGGAGAGCCAACCGAGAAATTGCGGGAGGCGGAATTCTCTTAGATCAAGGGATTCATATGGTAGATTTGATTCG
TCTTTTTGCAGGTGAGATGAACGAAATCAAAAGTTATGTTTCCAATAGCTATTGGAATTTAGACGTAGAAGACAATGCGT
TTGCTTTGATGAAATCTGAATCTGGAGTGATTGTTCAGTTTCAATCTACTGCAACCGAATGGCGTCATAGATTCAATCTG
CAGATTAATATGGGAGAGGGAAGTCTTGTACTTTCAGGAATTCTTTCTGGTTCTAAATCTTATGGGCAAGAGACATTAAC
GATCTATCCAAAAGATTTAGAGTCAGGTGGAAATCCAAGAATGGAAACGATCAATTATTTAGAAGACAATTCTTGGCGAG
ACGAAATCAACGAATTCACTGAGCATATTTTAAAAGACGAACCGATACGAACTGGCTCCAGTTTGGACGCGTATCAAACG
ATGAAGTTAGTATACCAAATTTATCATGCAGATCCGGTTTGGAGAGAACGGTATCAAATAGAATTTTAG

Upstream 100 bases:

>100_bases
CAGAAGGGGTGATGATTGGAGTGGACGTTCCAGGAGACGTTTCCAGAGTAGAGTCTGTTTTTAAAACGGACTTGTTACTA
TCGAAGTATTTATCATGAGT

Downstream 100 bases:

>100_bases
TGTTTCTCTTTCATTCATGAATGTAAAATCAAAAGTACAATTTTTACGACTTGCACAAGATATCGCCACTGAAGTCGGAC
GAACATTGCAAAAAAGAAAT

Product: oxidoreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKKLKVGIAGYGVVGKRRHQYIKQNPNLMVTAICDKSLQDERNAFDNLNIYQKFQDLIQKEELDILLVCLTNDVAAEATI
LGLKNGLHVFCEKPPGRNVQEISEVREVERQFPTLKLKYGFNHRYHDSIREALKIVSSGKMGKVVNIRGIYGKSAIVNVA
DGWRANREIAGGGILLDQGIHMVDLIRLFAGEMNEIKSYVSNSYWNLDVEDNAFALMKSESGVIVQFQSTATEWRHRFNL
QINMGEGSLVLSGILSGSKSYGQETLTIYPKDLESGGNPRMETINYLEDNSWRDEINEFTEHILKDEPIRTGSSLDAYQT
MKLVYQIYHADPVWRERYQIEF

Sequences:

>Translated_342_residues
MKKLKVGIAGYGVVGKRRHQYIKQNPNLMVTAICDKSLQDERNAFDNLNIYQKFQDLIQKEELDILLVCLTNDVAAEATI
LGLKNGLHVFCEKPPGRNVQEISEVREVERQFPTLKLKYGFNHRYHDSIREALKIVSSGKMGKVVNIRGIYGKSAIVNVA
DGWRANREIAGGGILLDQGIHMVDLIRLFAGEMNEIKSYVSNSYWNLDVEDNAFALMKSESGVIVQFQSTATEWRHRFNL
QINMGEGSLVLSGILSGSKSYGQETLTIYPKDLESGGNPRMETINYLEDNSWRDEINEFTEHILKDEPIRTGSSLDAYQT
MKLVYQIYHADPVWRERYQIEF
>Mature_342_residues
MKKLKVGIAGYGVVGKRRHQYIKQNPNLMVTAICDKSLQDERNAFDNLNIYQKFQDLIQKEELDILLVCLTNDVAAEATI
LGLKNGLHVFCEKPPGRNVQEISEVREVERQFPTLKLKYGFNHRYHDSIREALKIVSSGKMGKVVNIRGIYGKSAIVNVA
DGWRANREIAGGGILLDQGIHMVDLIRLFAGEMNEIKSYVSNSYWNLDVEDNAFALMKSESGVIVQFQSTATEWRHRFNL
QINMGEGSLVLSGILSGSKSYGQETLTIYPKDLESGGNPRMETINYLEDNSWRDEINEFTEHILKDEPIRTGSSLDAYQT
MKLVYQIYHADPVWRERYQIEF

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=355, Percent_Identity=24.5070422535211, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39033; Mature: 39033

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKVGIAGYGVVGKRRHQYIKQNPNLMVTAICDKSLQDERNAFDNLNIYQKFQDLIQK
CCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
EELDILLVCLTNDVAAEATILGLKNGLHVFCEKPPGRNVQEISEVREVERQFPTLKLKYG
CCCCEEEEEECCCCHHHEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEC
FNHRYHDSIREALKIVSSGKMGKVVNIRGIYGKSAIVNVADGWRANREIAGGGILLDQGI
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCEECCCCEEECCCC
HMVDLIRLFAGEMNEIKSYVSNSYWNLDVEDNAFALMKSESGVIVQFQSTATEWRHRFNL
HHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEECCHHHHHHHEEEE
QINMGEGSLVLSGILSGSKSYGQETLTIYPKDLESGGNPRMETINYLEDNSWRDEINEFT
EEECCCCCEEEHHHHCCCHHCCCCEEEEEEHHHCCCCCCCHHHHHHHCCCCHHHHHHHHH
EHILKDEPIRTGSSLDAYQTMKLVYQIYHADPVWRERYQIEF
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCEEECC
>Mature Secondary Structure
MKKLKVGIAGYGVVGKRRHQYIKQNPNLMVTAICDKSLQDERNAFDNLNIYQKFQDLIQK
CCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
EELDILLVCLTNDVAAEATILGLKNGLHVFCEKPPGRNVQEISEVREVERQFPTLKLKYG
CCCCEEEEEECCCCHHHEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEC
FNHRYHDSIREALKIVSSGKMGKVVNIRGIYGKSAIVNVADGWRANREIAGGGILLDQGI
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCCCCCCCEECCCCEEECCCC
HMVDLIRLFAGEMNEIKSYVSNSYWNLDVEDNAFALMKSESGVIVQFQSTATEWRHRFNL
HHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEECCHHHHHHHEEEE
QINMGEGSLVLSGILSGSKSYGQETLTIYPKDLESGGNPRMETINYLEDNSWRDEINEFT
EEECCCCCEEEHHHHCCCHHCCCCEEEEEEHHHCCCCCCCHHHHHHHCCCCHHHHHHHHH
EHILKDEPIRTGSSLDAYQTMKLVYQIYHADPVWRERYQIEF
HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]