Definition Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence.
Accession NC_008508
Length 3,614,446

Click here to switch to the map view.

The map label for this gene is 116327737

Identifier: 116327737

GI number: 116327737

Start: 1159354

End: 1160640

Strand: Direct

Name: 116327737

Synonym: LBL_0993

Alternate gene names: NA

Gene position: 1159354-1160640 (Clockwise)

Preceding gene: 116327736

Following gene: 116327738

Centisome position: 32.08

GC content: 43.28

Gene sequence:

>1287_bases
ATGTCGAAGTTCTCGGGGAAGATGCAAAAAATTTCGGACCTTTGGTTTCAATTCCGTAAATCCGGAATGTTTAAGTCATC
CCTTTTTGTCAGCGTTTCCAAGGCGGTTTCTTCGCTGCTCAATCTTGTGTTTATGGTCTATTCCGTAAACATACTCACAA
AAAGCGAGAACGGACTTTTTCAATATTATGCGGGATTTCTTCCAGTGTTACTTGCGATCGCGGAGTTCGGATTACCCGCG
GCGCTCGTGAAATTTTTAGCTCCCATCACCGGAGATAAACGAAAGATCGGAATCCTTTTATCTTCTTCCATGATCATCAA
ATTAGGTGCGCTCGGAGCTTTGACCTGTATCAGTTTTATGGGGGCTGTTCTTTTAAAGGAAAGTTCGATCGTGGTCGCGC
TTCTCGTATTGGGAAGTTTTATACTCTCATTCAATACTTTTTTTGAAAGCGTCTTTATCTGTTTCGGAAATTATATATCT
CTCTCGTTTTGGAATCCTCTGACGAATCTGATCCGGCTTCTGGTCTTGTATTTCGCGGATCAACTTACGGAAAGGGCGCT
CGGACATTTGGATATACTTGCGATCTTTACCGTGTCCCCGTTGTTCGTATTGGTCCTGTTTTTTTTCGTGTTTCCAAGAA
GGCAATTGTATTGGAGCGGAGAAAAAAGCGGAATTATGGAGATGACCTCGAAGTTGACTTCGTTTAACGGATATGCGTTT
TTAGCGTCTATCTTTGCGATGATTTCCGATAGAATGGAAATATTTTTTTTGAAGTGGTATCATTCACAGGAATCCGCAGC
CGTATACGGAACCGCCTTACAATTGTTCAGTGGGTTCGTGATTTTATTTTCGGTACTCAATTCTCTCATATATCCGAAGT
TATCCCGTTTGGTGGATTCCGAGGAATTTCCGAGGTTTCTATGGAAGTCCGTGATGTTGTCCGTCGGAATGGCGATACTA
TTATCTCCCGGATTTTTTACGGCGGAATGGATTCTAAATCTATTATTCCGAGGGAAATACGCGGACTCGATCGGGGTCTT
TCAGATCCTATATCCGAATTATATGATGCAGTTGGTGTTTTCGCCGTTCGGAATCGCGTTATTCGCCTTAGGTCAACCGA
GAATACTTGCGTTTTTGGCGTTGTTGCGGTTGGTGAGCGGTTTGGTTTTAGCGAATCTGCTCATACCGGAATACGGACCT
AACGGCGCGGCGTTTTCGTACTTCTTAGGACAAATAGTGTCTTGGCTCATCCTAATCGGGTACTTTTTAGCTTTCTTTCG
AAGATGA

Upstream 100 bases:

>100_bases
GTTGCAAGATACCTCCGGTATGGGATCGTTAGTAGTTATATCGCCTTTTTCTCGGCATACATATTGGTTAAGAGAAAGGA
AAAGGCTGATAAAAAATAGA

Downstream 100 bases:

>100_bases
AAGTACAAAGACGAACCCGAACCGAAAAAAAAACGGGCGGTTCCGCTACAGCGGGTTACGGGATTGAGTTTTTTCGATCC
CTACCGCAAAGACCGAGGAA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSKFSGKMQKISDLWFQFRKSGMFKSSLFVSVSKAVSSLLNLVFMVYSVNILTKSENGLFQYYAGFLPVLLAIAEFGLPA
ALVKFLAPITGDKRKIGILLSSSMIIKLGALGALTCISFMGAVLLKESSIVVALLVLGSFILSFNTFFESVFICFGNYIS
LSFWNPLTNLIRLLVLYFADQLTERALGHLDILAIFTVSPLFVLVLFFFVFPRRQLYWSGEKSGIMEMTSKLTSFNGYAF
LASIFAMISDRMEIFFLKWYHSQESAAVYGTALQLFSGFVILFSVLNSLIYPKLSRLVDSEEFPRFLWKSVMLSVGMAIL
LSPGFFTAEWILNLLFRGKYADSIGVFQILYPNYMMQLVFSPFGIALFALGQPRILAFLALLRLVSGLVLANLLIPEYGP
NGAAFSYFLGQIVSWLILIGYFLAFFRR

Sequences:

>Translated_428_residues
MSKFSGKMQKISDLWFQFRKSGMFKSSLFVSVSKAVSSLLNLVFMVYSVNILTKSENGLFQYYAGFLPVLLAIAEFGLPA
ALVKFLAPITGDKRKIGILLSSSMIIKLGALGALTCISFMGAVLLKESSIVVALLVLGSFILSFNTFFESVFICFGNYIS
LSFWNPLTNLIRLLVLYFADQLTERALGHLDILAIFTVSPLFVLVLFFFVFPRRQLYWSGEKSGIMEMTSKLTSFNGYAF
LASIFAMISDRMEIFFLKWYHSQESAAVYGTALQLFSGFVILFSVLNSLIYPKLSRLVDSEEFPRFLWKSVMLSVGMAIL
LSPGFFTAEWILNLLFRGKYADSIGVFQILYPNYMMQLVFSPFGIALFALGQPRILAFLALLRLVSGLVLANLLIPEYGP
NGAAFSYFLGQIVSWLILIGYFLAFFRR
>Mature_427_residues
SKFSGKMQKISDLWFQFRKSGMFKSSLFVSVSKAVSSLLNLVFMVYSVNILTKSENGLFQYYAGFLPVLLAIAEFGLPAA
LVKFLAPITGDKRKIGILLSSSMIIKLGALGALTCISFMGAVLLKESSIVVALLVLGSFILSFNTFFESVFICFGNYISL
SFWNPLTNLIRLLVLYFADQLTERALGHLDILAIFTVSPLFVLVLFFFVFPRRQLYWSGEKSGIMEMTSKLTSFNGYAFL
ASIFAMISDRMEIFFLKWYHSQESAAVYGTALQLFSGFVILFSVLNSLIYPKLSRLVDSEEFPRFLWKSVMLSVGMAILL
SPGFFTAEWILNLLFRGKYADSIGVFQILYPNYMMQLVFSPFGIALFALGQPRILAFLALLRLVSGLVLANLLIPEYGPN
GAAFSYFLGQIVSWLILIGYFLAFFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48077; Mature: 47946

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFSGKMQKISDLWFQFRKSGMFKSSLFVSVSKAVSSLLNLVFMVYSVNILTKSENGLF
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
QYYAGFLPVLLAIAEFGLPAALVKFLAPITGDKRKIGILLSSSMIIKLGALGALTCISFM
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
GAVLLKESSIVVALLVLGSFILSFNTFFESVFICFGNYISLSFWNPLTNLIRLLVLYFAD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHH
QLTERALGHLDILAIFTVSPLFVLVLFFFVFPRRQLYWSGEKSGIMEMTSKLTSFNGYAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHCCCHHHH
LASIFAMISDRMEIFFLKWYHSQESAAVYGTALQLFSGFVILFSVLNSLIYPKLSRLVDS
HHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EEFPRFLWKSVMLSVGMAILLSPGFFTAEWILNLLFRGKYADSIGVFQILYPNYMMQLVF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SPFGIALFALGQPRILAFLALLRLVSGLVLANLLIPEYGPNGAAFSYFLGQIVSWLILIG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YFLAFFRR
HHHHHHCC
>Mature Secondary Structure 
SKFSGKMQKISDLWFQFRKSGMFKSSLFVSVSKAVSSLLNLVFMVYSVNILTKSENGLF
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
QYYAGFLPVLLAIAEFGLPAALVKFLAPITGDKRKIGILLSSSMIIKLGALGALTCISFM
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
GAVLLKESSIVVALLVLGSFILSFNTFFESVFICFGNYISLSFWNPLTNLIRLLVLYFAD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHH
QLTERALGHLDILAIFTVSPLFVLVLFFFVFPRRQLYWSGEKSGIMEMTSKLTSFNGYAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHCCCHHHH
LASIFAMISDRMEIFFLKWYHSQESAAVYGTALQLFSGFVILFSVLNSLIYPKLSRLVDS
HHHHHHHHHCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EEFPRFLWKSVMLSVGMAILLSPGFFTAEWILNLLFRGKYADSIGVFQILYPNYMMQLVF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SPFGIALFALGQPRILAFLALLRLVSGLVLANLLIPEYGPNGAAFSYFLGQIVSWLILIG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YFLAFFRR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA