Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 116327493

GI number: 116327493

Start: 814385

End: 814876

Strand: Direct

Name: yajQ [C]

Synonym: LBL_0717

Alternate gene names: 116327493

Gene position: 814385-814876 (Clockwise)

Preceding gene: 116327492

Following gene: 116327494

Centisome position: 22.53

GC content: 44.11

Gene sequence:

>492_bases
ATGAGCGATCCATCCTTTGATGTGGTTTCCGAAATCAGCAGACCTGAGTTGACCAACGCGGTGACACAGGCTCTCGGAGA
GATCAAGAACCGTTTTGATTTTAAGGGTTCCAAGTCGGATATTCAACTCGAAGACGAACAACTCGTTTTAGTTTCGGACA
ACGAGGCCAAACTCGAAAGTGTGATCGATGTTCTTGTTTCCAAGATGGCAAAACGCGGCTTGGGTCTTAAGAACTTCGAT
TTCAAATCCAAAGTCGAACCAGCGACAGGCGGAACCGTTCGGATGAAAGTGAAAATCCGTAAGGGAATGGAAAAGGAACA
AACCAAGGAAGTCACCCGTATCATAAAAGAATCCAAGTTGAAAGTCAACGTCACGATCATGGGAGAATCCGTTCGCGTCA
CCGGTAAGAAAAAAGACGATCTTCAGGAAGTGATCCATCTTTTGAAAAATGCGGATTTTCCGTTTGATGTTCAGTTTACG
AATTACAAGTAA

Upstream 100 bases:

>100_bases
CGGACATGGCTCAGGGCGGCGGTAAGGAAAAACAAAACTTGGAATCCGCTATCTCTTTCGCGATCCAATTAGCAAAACAA
ACTTTAACCGGAGAAAAAGT

Downstream 100 bases:

>100_bases
TCGACCTTCTTCTTGACAGACTTTAAACGATCTGCCAAACTTATCGAACGAGAGAGCCTGAGATAACGGAGCGTTTATCG
AAGACTCTCAGCAAGCAGAG

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSDPSFDVVSEISRPELTNAVTQALGEIKNRFDFKGSKSDIQLEDEQLVLVSDNEAKLESVIDVLVSKMAKRGLGLKNFD
FKSKVEPATGGTVRMKVKIRKGMEKEQTKEVTRIIKESKLKVNVTIMGESVRVTGKKKDDLQEVIHLLKNADFPFDVQFT
NYK

Sequences:

>Translated_163_residues
MSDPSFDVVSEISRPELTNAVTQALGEIKNRFDFKGSKSDIQLEDEQLVLVSDNEAKLESVIDVLVSKMAKRGLGLKNFD
FKSKVEPATGGTVRMKVKIRKGMEKEQTKEVTRIIKESKLKVNVTIMGESVRVTGKKKDDLQEVIHLLKNADFPFDVQFT
NYK
>Mature_162_residues
SDPSFDVVSEISRPELTNAVTQALGEIKNRFDFKGSKSDIQLEDEQLVLVSDNEAKLESVIDVLVSKMAKRGLGLKNFDF
KSKVEPATGGTVRMKVKIRKGMEKEQTKEVTRIIKESKLKVNVTIMGESVRVTGKKKDDLQEVIHLLKNADFPFDVQFTN
YK

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=162, Percent_Identity=34.5679012345679, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2391_LEPBJ (Q04QG7)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_801611.1
- ProteinModelPortal:   Q04QG7
- SMR:   Q04QG7
- STRING:   Q04QG7
- GeneID:   4410017
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_2391
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   Q04QG7
- ProtClustDB:   PRK05412
- BioCyc:   LBOR355277:LBJ_2391-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18378; Mature: 18247

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPSFDVVSEISRPELTNAVTQALGEIKNRFDFKGSKSDIQLEDEQLVLVSDNEAKLES
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCHHHHHH
VIDVLVSKMAKRGLGLKNFDFKSKVEPATGGTVRMKVKIRKGMEKEQTKEVTRIIKESKL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHCCE
KVNVTIMGESVRVTGKKKDDLQEVIHLLKNADFPFDVQFTNYK
EEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure 
SDPSFDVVSEISRPELTNAVTQALGEIKNRFDFKGSKSDIQLEDEQLVLVSDNEAKLES
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCHHHHHH
VIDVLVSKMAKRGLGLKNFDFKSKVEPATGGTVRMKVKIRKGMEKEQTKEVTRIIKESKL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHCCE
KVNVTIMGESVRVTGKKKDDLQEVIHLLKNADFPFDVQFTNYK
EEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA