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The map label for this gene is ybcL [H]

Identifier: 116327485

GI number: 116327485

Start: 803343

End: 803888

Strand: Direct

Name: ybcL [H]

Synonym: LBL_0708

Alternate gene names: 116327485

Gene position: 803343-803888 (Clockwise)

Preceding gene: 116327484

Following gene: 116327487

Centisome position: 22.23

GC content: 43.04

Gene sequence:

>546_bases
ATGAAAATCAAAGGATTCGTATTCGTATTTTTGATTTCCGCAACTTTACTTCAAGCGGAACCGTTTCAATTGAAAAGTCC
CGAATTGACTTCCGGTAAACTTATCGCCAACGAACAGGTGTTTAACGGTTTCGGATGTTCCGGTGGAAACATTTCTCCCG
CGTTATCTTGGACTGGTCTTCCGAAAAATACAAAGAGTATCGCTATAACCGTTTATGATCCGGACGCACCGACTGGCAGT
GGATGGTGGCATTGGGTGGTTTTTAATATCCCAGCTACTACAACTTCTATTCCTGCAAACGCCGGAAACTTAGAAAAAAA
TCTTCTTCCAAAAGAGGCGATTCAAAGCAGAACTGATTTCGGCATGCCTGGTTATGGCGGTCCTTGTCCGCCTCAAGGTC
ACAAACCTCATCGCTATTATTTCACCGTTTATGCTCTTAAAGATAGGATTTCGGCCGATCAGAATTCTTCCGGCGCCTTG
ATCGGCTTTTACATCAATTCTCTTAAAATCGGTGAAGCTAAAATTTTGGCGAAATACGGCAGATAA

Upstream 100 bases:

>100_bases
GACTACACTTCGATTTTTTAAAAAATTGAAAAACTCGTCTTGCAATTGATATAAGTTTCTATTGAACTATAAGTTTGAAT
TTAAATAGGAGATTCGTTTT

Downstream 100 bases:

>100_bases
CAGATTACAAGTGATCGGAACCTGTTCTTTGATTTTTAGAACGGGTTCTTTTATATTAGGTATCTTATTATGTGATTTTA
GGTAATAAAGGTGTTGTTTG

Product: phospholipid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKIKGFVFVFLISATLLQAEPFQLKSPELTSGKLIANEQVFNGFGCSGGNISPALSWTGLPKNTKSIAITVYDPDAPTGS
GWWHWVVFNIPATTTSIPANAGNLEKNLLPKEAIQSRTDFGMPGYGGPCPPQGHKPHRYYFTVYALKDRISADQNSSGAL
IGFYINSLKIGEAKILAKYGR

Sequences:

>Translated_181_residues
MKIKGFVFVFLISATLLQAEPFQLKSPELTSGKLIANEQVFNGFGCSGGNISPALSWTGLPKNTKSIAITVYDPDAPTGS
GWWHWVVFNIPATTTSIPANAGNLEKNLLPKEAIQSRTDFGMPGYGGPCPPQGHKPHRYYFTVYALKDRISADQNSSGAL
IGFYINSLKIGEAKILAKYGR
>Mature_181_residues
MKIKGFVFVFLISATLLQAEPFQLKSPELTSGKLIANEQVFNGFGCSGGNISPALSWTGLPKNTKSIAITVYDPDAPTGS
GWWHWVVFNIPATTTSIPANAGNLEKNLLPKEAIQSRTDFGMPGYGGPCPPQGHKPHRYYFTVYALKDRISADQNSSGAL
IGFYINSLKIGEAKILAKYGR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=177, Percent_Identity=53.6723163841808, Blast_Score=200, Evalue=5e-53,
Organism=Escherichia coli, GI1786990, Length=159, Percent_Identity=47.1698113207547, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19625; Mature: 19625

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKGFVFVFLISATLLQAEPFQLKSPELTSGKLIANEQVFNGFGCSGGNISPALSWTGL
CCCCCEEHEEHHHHHHHCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCEEECCC
PKNTKSIAITVYDPDAPTGSGWWHWVVFNIPATTTSIPANAGNLEKNLLPKEAIQSRTDF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCHHCCCHHHHHCCCCC
GMPGYGGPCPPQGHKPHRYYFTVYALKDRISADQNSSGALIGFYINSLKIGEAKILAKYG
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCEEEEEECC
R
C
>Mature Secondary Structure
MKIKGFVFVFLISATLLQAEPFQLKSPELTSGKLIANEQVFNGFGCSGGNISPALSWTGL
CCCCCEEHEEHHHHHHHCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCEEECCC
PKNTKSIAITVYDPDAPTGSGWWHWVVFNIPATTTSIPANAGNLEKNLLPKEAIQSRTDF
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCHHCCCHHHHHCCCCC
GMPGYGGPCPPQGHKPHRYYFTVYALKDRISADQNSSGALIGFYINSLKIGEAKILAKYG
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCEEEEEECC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]