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The map label for this gene is sufE [H]

Identifier: 116327418

GI number: 116327418

Start: 699655

End: 700065

Strand: Direct

Name: sufE [H]

Synonym: LBL_0627

Alternate gene names: 116327418

Gene position: 699655-700065 (Clockwise)

Preceding gene: 116327416

Following gene: 116327423

Centisome position: 19.36

GC content: 43.07

Gene sequence:

>411_bases
TTGGAAAGAGGCATGAGTAGTATTGCGGAAGTTCAGAAAGAAATCGTGTCCGAATTTTCGGAATGTACTGATTGGCAGGA
ACGTTATCAACTTCTAATAGAAATGGGAGACGAGCTTGGGTCGCTTCCTGATTCCGTAAAAACTTCCGAACGTTTGGTTC
CCGGATGCCAATCTAGAGTTTGGATTGTTGCCGAGGAAAAAGACGGTAAGATAGAATTCCAAGCGGACAGCGATTCGGCG
ATTACCCGCGGGATGATCGCTCTTCTTATTCGCGTTTTTTCTGGACGTACCCGAGAAGAAATTAAAAGTACTTCTCTCGA
ATTTTTAAAAGAGATCGGTCTTGACAAACATCTTTCGATGTCTAGACGAAACGGTCTCTATTCCATGGTTAATATTCTCC
GAAATAGCTGA

Upstream 100 bases:

>100_bases
GTTGAGAGCTCTCACGACGCTCCGCTGTTCGCTGCTATCTCGGCTCTCTACGGATCGCTCGATAGGTTTTCTGATTGCTT
GCGAGAGAATTGAGGAAAAG

Downstream 100 bases:

>100_bases
AGGATCTTTTTACATCGCTTCCGGTCGATCCGACAGTTCGTTCGGGTTTTGTTTTTCGGAAGGAAAATATTTTTGAAAAA
GTTGTGTGAATTCTTCAATT

Product: Fe-S metabolism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MERGMSSIAEVQKEIVSEFSECTDWQERYQLLIEMGDELGSLPDSVKTSERLVPGCQSRVWIVAEEKDGKIEFQADSDSA
ITRGMIALLIRVFSGRTREEIKSTSLEFLKEIGLDKHLSMSRRNGLYSMVNILRNS

Sequences:

>Translated_136_residues
MERGMSSIAEVQKEIVSEFSECTDWQERYQLLIEMGDELGSLPDSVKTSERLVPGCQSRVWIVAEEKDGKIEFQADSDSA
ITRGMIALLIRVFSGRTREEIKSTSLEFLKEIGLDKHLSMSRRNGLYSMVNILRNS
>Mature_136_residues
MERGMSSIAEVQKEIVSEFSECTDWQERYQLLIEMGDELGSLPDSVKTSERLVPGCQSRVWIVAEEKDGKIEFQADSDSA
ITRGMIALLIRVFSGRTREEIKSTSLEFLKEIGLDKHLSMSRRNGLYSMVNILRNS

Specific function: Participates in cysteine desulfuration mediated by sufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L-alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Fun

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1789176, Length=115, Percent_Identity=38.2608695652174, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI1787969, Length=120, Percent_Identity=34.1666666666667, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 15464; Mature: 15464

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERGMSSIAEVQKEIVSEFSECTDWQERYQLLIEMGDELGSLPDSVKTSERLVPGCQSRV
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCE
WIVAEEKDGKIEFQADSDSAITRGMIALLIRVFSGRTREEIKSTSLEFLKEIGLDKHLSM
EEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
SRRNGLYSMVNILRNS
HHHCCHHHHHHHHHCC
>Mature Secondary Structure
MERGMSSIAEVQKEIVSEFSECTDWQERYQLLIEMGDELGSLPDSVKTSERLVPGCQSRV
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCE
WIVAEEKDGKIEFQADSDSAITRGMIALLIRVFSGRTREEIKSTSLEFLKEIGLDKHLSM
EEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHH
SRRNGLYSMVNILRNS
HHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]