| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327390
Identifier: 116327390
GI number: 116327390
Start: 657916
End: 658461
Strand: Direct
Name: 116327390
Synonym: LBL_0590
Alternate gene names: NA
Gene position: 657916-658461 (Clockwise)
Preceding gene: 116327389
Following gene: 116327393
Centisome position: 18.2
GC content: 39.19
Gene sequence:
>546_bases ATGAAAATTTTTGCGTTGAGTGTTTTAGTTTTGGGATTGTTGCTTGTTGTTTTCTTGTTTTACATGGGCGCGTTCGATCG AGTTCGGATTCGAGAAGAAGTGAAGGGACCTTTTTACGTTCTCTCTCATGAAAGAATCGGCGATTATAGAAACGTCGGCC TCACGTTTGAAGTGCTTCAAAAAGAGTTACCAAAAAAAGGAATTCGTGATTTTAAGTTGTTCTCCATTTATTTGGATAAT CCCAATGACGTTCCGAAGGAAAAGCTACGATGCGAAGTAGGCGCACTTTTTGCGGAGCCATTGTCAAAAGTTCCCGAAGG GCTTTCTTTGGATCTTAAAACAAGAACCATTCCTTCCCGAAAATATATCTTTGCGGAATTCCCTTTGAAAAACTTTCTTT CCATCTTTCTCGGAATCTATAAGGTTTATCCGAAACTTTTTAGAGTCTGCGAAGAAAGAGGTTGTAATTTAAAAGGAAGG GCATCAATGGAAATTTACGAACCTCTCACGGAACACAAGACAACGTATCTACTTCCTATGGATTGA
Upstream 100 bases:
>100_bases TACGATCATAGATCCGTTTTTAAGAGATATTCTTACATGTTCTATATAAATATGAGTTTGATAGTCCCTTTCTTTCTAAT TTTAATTCTTTGAGGAGTTT
Downstream 100 bases:
>100_bases AAATTCTTACGAAAGCGATACTTATGTTGCGATCCATAGTGAGCAATACTTTAGTTTGGAAATTCCGAAAAATTGGAATG GAGCCTTGCTTGCAAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKIFALSVLVLGLLLVVFLFYMGAFDRVRIREEVKGPFYVLSHERIGDYRNVGLTFEVLQKELPKKGIRDFKLFSIYLDN PNDVPKEKLRCEVGALFAEPLSKVPEGLSLDLKTRTIPSRKYIFAEFPLKNFLSIFLGIYKVYPKLFRVCEERGCNLKGR ASMEIYEPLTEHKTTYLLPMD
Sequences:
>Translated_181_residues MKIFALSVLVLGLLLVVFLFYMGAFDRVRIREEVKGPFYVLSHERIGDYRNVGLTFEVLQKELPKKGIRDFKLFSIYLDN PNDVPKEKLRCEVGALFAEPLSKVPEGLSLDLKTRTIPSRKYIFAEFPLKNFLSIFLGIYKVYPKLFRVCEERGCNLKGR ASMEIYEPLTEHKTTYLLPMD >Mature_181_residues MKIFALSVLVLGLLLVVFLFYMGAFDRVRIREEVKGPFYVLSHERIGDYRNVGLTFEVLQKELPKKGIRDFKLFSIYLDN PNDVPKEKLRCEVGALFAEPLSKVPEGLSLDLKTRTIPSRKYIFAEFPLKNFLSIFLGIYKVYPKLFRVCEERGCNLKGR ASMEIYEPLTEHKTTYLLPMD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21022; Mature: 21022
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFALSVLVLGLLLVVFLFYMGAFDRVRIREEVKGPFYVLSHERIGDYRNVGLTFEVLQ CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHCCCHHCCCCHHHHHH KELPKKGIRDFKLFSIYLDNPNDVPKEKLRCEVGALFAEPLSKVPEGLSLDLKTRTIPSR HHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC KYIFAEFPLKNFLSIFLGIYKVYPKLFRVCEERGCNLKGRASMEIYEPLTEHKTTYLLPM CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEC D C >Mature Secondary Structure MKIFALSVLVLGLLLVVFLFYMGAFDRVRIREEVKGPFYVLSHERIGDYRNVGLTFEVLQ CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHCCCHHCCCCHHHHHH KELPKKGIRDFKLFSIYLDNPNDVPKEKLRCEVGALFAEPLSKVPEGLSLDLKTRTIPSR HHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC KYIFAEFPLKNFLSIFLGIYKVYPKLFRVCEERGCNLKGRASMEIYEPLTEHKTTYLLPM CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA