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The map label for this gene is 116327377

Identifier: 116327377

GI number: 116327377

Start: 640637

End: 640990

Strand: Direct

Name: 116327377

Synonym: LBL_0575

Alternate gene names: NA

Gene position: 640637-640990 (Clockwise)

Preceding gene: 116327376

Following gene: 116327378

Centisome position: 17.72

GC content: 42.66

Gene sequence:

>354_bases
ATGCAAAACCCGAGATGGAAAGATTGGTTCGCTCAGGCTGAAAGAGATTTGGAATGGGCCAAGGTATCTTTGCATTCGGG
TTTTTTTGCTCAAACCTGTTTTGTCTGTCAGCAAGTGGGGGAAAAATCTCTCAAAGCGTTGGCATTCTTTCGCGGAGCCG
ATCTCGTAAAATCCCATTCGGTAAAAACGATTGTGAAAGAATCGAACGAAAACGGGGAGATTGAATCGATCGGTCGAAAA
TTAGATTTATATTATATACCTACTCGTTACCCTGACGCCTTTATGGAAGGCGCTCCTTTTGAATATTTCGAAGAATCCCG
GCAAAAGAAGCTATCGAATTTGCAGAAACGTTGA

Upstream 100 bases:

>100_bases
AGCAAAGAGTTTCCGGAAACTATAGCAAGGCTCGTCCAAAGCAGATTTATACCGGAGAAATGGGTAGGAAATACGTTCCT
CTTTCGGAAAGATAGCTACG

Downstream 100 bases:

>100_bases
TCCGTATCGCTCGCGAAAAAATCCCATGAGCGTTATCGTTTTCCCAAAACGGGATCCGTTCGGCGGCATGAGCCGGGAAG
AGTTGATCGAAACGATCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein; Hepn Domain Protein; Hepn Domain-Containing Protein; Hepn Domain

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MQNPRWKDWFAQAERDLEWAKVSLHSGFFAQTCFVCQQVGEKSLKALAFFRGADLVKSHSVKTIVKESNENGEIESIGRK
LDLYYIPTRYPDAFMEGAPFEYFEESRQKKLSNLQKR

Sequences:

>Translated_117_residues
MQNPRWKDWFAQAERDLEWAKVSLHSGFFAQTCFVCQQVGEKSLKALAFFRGADLVKSHSVKTIVKESNENGEIESIGRK
LDLYYIPTRYPDAFMEGAPFEYFEESRQKKLSNLQKR
>Mature_117_residues
MQNPRWKDWFAQAERDLEWAKVSLHSGFFAQTCFVCQQVGEKSLKALAFFRGADLVKSHSVKTIVKESNENGEIESIGRK
LDLYYIPTRYPDAFMEGAPFEYFEESRQKKLSNLQKR

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13673; Mature: 13673

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNPRWKDWFAQAERDLEWAKVSLHSGFFAQTCFVCQQVGEKSLKALAFFRGADLVKSHS
CCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VKTIVKESNENGEIESIGRKLDLYYIPTRYPDAFMEGAPFEYFEESRQKKLSNLQKR
HHHHHHCCCCCCCHHHHCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQNPRWKDWFAQAERDLEWAKVSLHSGFFAQTCFVCQQVGEKSLKALAFFRGADLVKSHS
CCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VKTIVKESNENGEIESIGRKLDLYYIPTRYPDAFMEGAPFEYFEESRQKKLSNLQKR
HHHHHHCCCCCCCHHHHCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA