| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is ybbP [H]
Identifier: 116327375
GI number: 116327375
Start: 636419
End: 638956
Strand: Direct
Name: ybbP [H]
Synonym: LBL_0573
Alternate gene names: 116327375
Gene position: 636419-638956 (Clockwise)
Preceding gene: 116327374
Following gene: 116327376
Centisome position: 17.61
GC content: 41.45
Gene sequence:
>2538_bases ATGAAATTCAAATTATTGATCCAATCCGTATTGCGAGACTTTCAATCCAGAAAAAGTTCCGCGTTGCAGATCGTATTTGC GATTGCGATCGGAACAGGCTCCGTTACCGCAATACACGCTTATCGGGAAGAGTTAAGTCGCTCCATTTTAAAGGAAGCGC GTAATTTGATGGGCTCCGATTTACTTGTTCAATCTTCTTCCCCTTTGACTCGGGAGCAAAAAAAATTTATGTCTCTTACT TTGCCAAAAGGCTCCGAAACAGCGGAACTTGTGCAGTTTGCTTCTATGCTTCGGAATCAGGAAAACGACGAAACTTCTTT GTCTTTGATTAAAACAAAGTCGGGAGGTTTCCCTTATTACGGTGAGATCGTCACGGAGCCTACGGATGCATATCACAAAC TTAAAGAAGGAGAAATTCTCCTAGAAGAAAGTTTAATTCGGAATTTAAAGCTGAAAACGGGATCCCACGTTTTACTTGGA GAAAGGAAATTTATTTTAAAAGGAAAAATCCTCAAGGAACCGGGACTCGCAGGAAATTTTCTTTCCATGGCTCCCACTTC GATCATATCCGGGGCTTCGCTTGCATCGACCGGATTGGAACAAAGAGGTTCGAGAATCAGTTATTTGATTCCGATTAAAC TCCGGGATCCTTTGATCGCTGGAAAATATAAGGAAACGAATTTTAAGAAGTATATTCAAAAAGACTTAACTCTTTACGAT TCAACGGAAACGAATTCGGGTTCCAGGAAATTTTTGGCGAATACGTTGGATTTCTTCAGTCTTCTCGGTTTATCCGCGTT CTTTCTGGGAGGGATCTCTATTTTACTCGTTAGTCGCGCGGGAATTCGGGAAAAGTCGGGAGCGCTTGCGGTCTTAAAAT GTTTGGGAGCGAGCCCGGGAACCGTAAGTTGGATCGTCTTAGGGGAATTATTCTTCTTTTCGTTGATCGGTTCTGTTTTG GGAATCCTGTTTGGAAACGTATTGTTGGAATGGATTCCCGATCTTGCGGGAGAGGATATGTTGAGTTTTCATCCGACTAT AGGATTTTCCTCCTTACTGTGGGGGCTTTTTATCGGAATCTTAATCCCGTTTTTCTCTTCCATTGAATCGTTAGTCGAAA TTCGAACCCTAAAACCGATCCTCGCTATCAAGCAGGAGTTCCAGGAAGAAACAAATCGAATCCCTCGGTTTAGAGTCACT CGGATCGCAGGGTATCTGATTTTGTTTTTTTCGTTTTTTGTATTGGCATGGTGGGAAACCGAAAGTCCCTTAAAAGGTTT GATTCTCTGTTCCGTCTTATTCGCCTTGCCGTTAATCGTATTTTTAGTATATTCCGTAATTATAATATTTATTTCGAGAT TTAGGAACCGAGGGAATTTTTCTCCGTTCGTGGTGTTTGTTGTCGGAAGGTTCGACGGGCCGGGCACCTCTCTTTCGCTT TCCGTCGTCGGTTTGACGAGTTCTCTTTTTATTCTTATTTTGTCTTTGATCATAAGTGAAAGCCTTTTGGAATACAGCGG AGCCAAAGACAAAGAAAGAAGACCGAATCTTTTTGTGTTGGATATTCGGGCAGAACAAAAGGAACATTTTGAAGAAGTTG TAAAAGAATTTGGCGCTGAAAAAGTAATCGTGGCGCCCGTGATCGGGGCGAGGTTGTCCAAGATCAACGGGGAAGTCATT AAAAAAGACGAAACCGAAATTTCCGCTTTTAAGAGGGATTGGAGATCCACCGCAAGAACCAGGGAATATTTTCTCTCCTA TCGAAACGATCCGTATCCCACGGAAAAAATTATAGACGGAGATTTTTGGAGAAAAGGAGAAGAGGATCAAATTTCGATCG AAAAGGAATTCTCCGAACATCTGAGAGTAAACTTGGGGGACAGTTTGACCTTTCTAATCGGTGGAGTCGAAGTTACGGGT GTGATCCGGAATTTCAGAACTGTGAATTGGGCGGATATGCGGCCGAATTTTGTGGTGTTGTTCTCGAAAGGAATTTTGGA AAAAGCCCCGAGTTACTATTTGAGTTCTTTGAGAATCGAATCCGAGGAAAAAAGATATAACCTTCAAAAGAGCCTGATTT CGAAATATCCGAATTTGACGATCATTGATACGGATAAAGCGATACGAGCTTTTTTAGGAATTCTGGAAAAAATATCTTTT ACGATTCGATTGATGACCTGGTTGATCTTAGGCGCCTCTTTGTTGCTTGTTTTAACCGCTCTGAATTCAAGCCGTAAAGA GAGAATTGAAGAGACGACTTTGTTACGGATCATCGGCGGGACCTCCGGTTTTTTGAAAAAGGTTTTTTTGTGGGAAGGGC TTCTTCTGGGAACGTTTTCATTTTTATTGGCCTTGCTGTTGGCTTGGATTGCAAATACATTGATCAGTCGACAGATTTTA GAGATACAACCTTCGTATCCTTTTTTTGAATACGTAATTGCCTATATGTTTACGATTTTCGCAACTACTTCAGTTTATTA TATAAATCTAAGAGGGGAATGGAAAAAACCCCCCATTACTTTTATGAAGACGGTTTGA
Upstream 100 bases:
>100_bases AGAAAGCTCATTCCTTAAGGGGTTCGAAAATTTCCTCTGCGGAGAAAAAAAACGCATCAAAATCCTCCTCTACAAAAAGA AAAATTTCCCGGAAAAAACG
Downstream 100 bases:
>100_bases AATTCAACCTATAACTAACGTAAATTCGATATAAGGTTCCGTCCCAAAACGTAGGAACAATTGCGCGACCCGCAAGGATT CCGATAAGATCGAACGGTTT
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 845; Mature: 845
Protein sequence:
>845_residues MKFKLLIQSVLRDFQSRKSSALQIVFAIAIGTGSVTAIHAYREELSRSILKEARNLMGSDLLVQSSSPLTREQKKFMSLT LPKGSETAELVQFASMLRNQENDETSLSLIKTKSGGFPYYGEIVTEPTDAYHKLKEGEILLEESLIRNLKLKTGSHVLLG ERKFILKGKILKEPGLAGNFLSMAPTSIISGASLASTGLEQRGSRISYLIPIKLRDPLIAGKYKETNFKKYIQKDLTLYD STETNSGSRKFLANTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGALAVLKCLGASPGTVSWIVLGELFFFSLIGSVL GILFGNVLLEWIPDLAGEDMLSFHPTIGFSSLLWGLFIGILIPFFSSIESLVEIRTLKPILAIKQEFQEETNRIPRFRVT RIAGYLILFFSFFVLAWWETESPLKGLILCSVLFALPLIVFLVYSVIIIFISRFRNRGNFSPFVVFVVGRFDGPGTSLSL SVVGLTSSLFILILSLIISESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVVKEFGAEKVIVAPVIGARLSKINGEVI KKDETEISAFKRDWRSTARTREYFLSYRNDPYPTEKIIDGDFWRKGEEDQISIEKEFSEHLRVNLGDSLTFLIGGVEVTG VIRNFRTVNWADMRPNFVVLFSKGILEKAPSYYLSSLRIESEEKRYNLQKSLISKYPNLTIIDTDKAIRAFLGILEKISF TIRLMTWLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSGFLKKVFLWEGLLLGTFSFLLALLLAWIANTLISRQIL EIQPSYPFFEYVIAYMFTIFATTSVYYINLRGEWKKPPITFMKTV
Sequences:
>Translated_845_residues MKFKLLIQSVLRDFQSRKSSALQIVFAIAIGTGSVTAIHAYREELSRSILKEARNLMGSDLLVQSSSPLTREQKKFMSLT LPKGSETAELVQFASMLRNQENDETSLSLIKTKSGGFPYYGEIVTEPTDAYHKLKEGEILLEESLIRNLKLKTGSHVLLG ERKFILKGKILKEPGLAGNFLSMAPTSIISGASLASTGLEQRGSRISYLIPIKLRDPLIAGKYKETNFKKYIQKDLTLYD STETNSGSRKFLANTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGALAVLKCLGASPGTVSWIVLGELFFFSLIGSVL GILFGNVLLEWIPDLAGEDMLSFHPTIGFSSLLWGLFIGILIPFFSSIESLVEIRTLKPILAIKQEFQEETNRIPRFRVT RIAGYLILFFSFFVLAWWETESPLKGLILCSVLFALPLIVFLVYSVIIIFISRFRNRGNFSPFVVFVVGRFDGPGTSLSL SVVGLTSSLFILILSLIISESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVVKEFGAEKVIVAPVIGARLSKINGEVI KKDETEISAFKRDWRSTARTREYFLSYRNDPYPTEKIIDGDFWRKGEEDQISIEKEFSEHLRVNLGDSLTFLIGGVEVTG VIRNFRTVNWADMRPNFVVLFSKGILEKAPSYYLSSLRIESEEKRYNLQKSLISKYPNLTIIDTDKAIRAFLGILEKISF TIRLMTWLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSGFLKKVFLWEGLLLGTFSFLLALLLAWIANTLISRQIL EIQPSYPFFEYVIAYMFTIFATTSVYYINLRGEWKKPPITFMKTV >Mature_845_residues MKFKLLIQSVLRDFQSRKSSALQIVFAIAIGTGSVTAIHAYREELSRSILKEARNLMGSDLLVQSSSPLTREQKKFMSLT LPKGSETAELVQFASMLRNQENDETSLSLIKTKSGGFPYYGEIVTEPTDAYHKLKEGEILLEESLIRNLKLKTGSHVLLG ERKFILKGKILKEPGLAGNFLSMAPTSIISGASLASTGLEQRGSRISYLIPIKLRDPLIAGKYKETNFKKYIQKDLTLYD STETNSGSRKFLANTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGALAVLKCLGASPGTVSWIVLGELFFFSLIGSVL GILFGNVLLEWIPDLAGEDMLSFHPTIGFSSLLWGLFIGILIPFFSSIESLVEIRTLKPILAIKQEFQEETNRIPRFRVT RIAGYLILFFSFFVLAWWETESPLKGLILCSVLFALPLIVFLVYSVIIIFISRFRNRGNFSPFVVFVVGRFDGPGTSLSL SVVGLTSSLFILILSLIISESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVVKEFGAEKVIVAPVIGARLSKINGEVI KKDETEISAFKRDWRSTARTREYFLSYRNDPYPTEKIIDGDFWRKGEEDQISIEKEFSEHLRVNLGDSLTFLIGGVEVTG VIRNFRTVNWADMRPNFVVLFSKGILEKAPSYYLSSLRIESEEKRYNLQKSLISKYPNLTIIDTDKAIRAFLGILEKISF TIRLMTWLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSGFLKKVFLWEGLLLGTFSFLLALLLAWIANTLISRQIL EIQPSYPFFEYVIAYMFTIFATTSVYYINLRGEWKKPPITFMKTV
Specific function: Unknown
COG id: COG3127
COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1786704, Length=324, Percent_Identity=25.6172839506173, Blast_Score=116, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 95219; Mature: 95219
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKLLIQSVLRDFQSRKSSALQIVFAIAIGTGSVTAIHAYREELSRSILKEARNLMGSD CCHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LLVQSSSPLTREQKKFMSLTLPKGSETAELVQFASMLRNQENDETSLSLIKTKSGGFPYY EEEECCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC GEIVTEPTDAYHKLKEGEILLEESLIRNLKLKTGSHVLLGERKFILKGKILKEPGLAGNF CCEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCEECCCCCCCCH LSMAPTSIISGASLASTGLEQRGSRISYLIPIKLRDPLIAGKYKETNFKKYIQKDLTLYD HHHCHHHHHCCCHHHHHCHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCEEEE STETNSGSRKFLANTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGALAVLKCLGASPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC TVSWIVLGELFFFSLIGSVLGILFGNVLLEWIPDLAGEDMLSFHPTIGFSSLLWGLFIGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHH LIPFFSSIESLVEIRTLKPILAIKQEFQEETNRIPRFRVTRIAGYLILFFSFFVLAWWET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ESPLKGLILCSVLFALPLIVFLVYSVIIIFISRFRNRGNFSPFVVFVVGRFDGPGTSLSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEE SVVGLTSSLFILILSLIISESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVVKEFGAE EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC KVIVAPVIGARLSKINGEVIKKDETEISAFKRDWRSTARTREYFLSYRNDPYPTEKIIDG CEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC DFWRKGEEDQISIEKEFSEHLRVNLGDSLTFLIGGVEVTGVIRNFRTVNWADMRPNFVVL HHCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEE FSKGILEKAPSYYLSSLRIESEEKRYNLQKSLISKYPNLTIIDTDKAIRAFLGILEKISF EECCHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHH TIRLMTWLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSGFLKKVFLWEGLLLGTFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH FLLALLLAWIANTLISRQILEIQPSYPFFEYVIAYMFTIFATTSVYYINLRGEWKKPPIT HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCC FMKTV CEECC >Mature Secondary Structure MKFKLLIQSVLRDFQSRKSSALQIVFAIAIGTGSVTAIHAYREELSRSILKEARNLMGSD CCHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LLVQSSSPLTREQKKFMSLTLPKGSETAELVQFASMLRNQENDETSLSLIKTKSGGFPYY EEEECCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC GEIVTEPTDAYHKLKEGEILLEESLIRNLKLKTGSHVLLGERKFILKGKILKEPGLAGNF CCEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCEECCCCCCCCH LSMAPTSIISGASLASTGLEQRGSRISYLIPIKLRDPLIAGKYKETNFKKYIQKDLTLYD HHHCHHHHHCCCHHHHHCHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCEEEE STETNSGSRKFLANTLDFFSLLGLSAFFLGGISILLVSRAGIREKSGALAVLKCLGASPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC TVSWIVLGELFFFSLIGSVLGILFGNVLLEWIPDLAGEDMLSFHPTIGFSSLLWGLFIGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHH LIPFFSSIESLVEIRTLKPILAIKQEFQEETNRIPRFRVTRIAGYLILFFSFFVLAWWET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ESPLKGLILCSVLFALPLIVFLVYSVIIIFISRFRNRGNFSPFVVFVVGRFDGPGTSLSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEE SVVGLTSSLFILILSLIISESLLEYSGAKDKERRPNLFVLDIRAEQKEHFEEVVKEFGAE EEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCC KVIVAPVIGARLSKINGEVIKKDETEISAFKRDWRSTARTREYFLSYRNDPYPTEKIIDG CEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC DFWRKGEEDQISIEKEFSEHLRVNLGDSLTFLIGGVEVTGVIRNFRTVNWADMRPNFVVL HHCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEE FSKGILEKAPSYYLSSLRIESEEKRYNLQKSLISKYPNLTIIDTDKAIRAFLGILEKISF EECCHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHH TIRLMTWLILGASLLLVLTALNSSRKERIEETTLLRIIGGTSGFLKKVFLWEGLLLGTFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH FLLALLLAWIANTLISRQILEIQPSYPFFEYVIAYMFTIFATTSVYYINLRGEWKKPPIT HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCC FMKTV CEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]