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The map label for this gene is uidR [C]

Identifier: 116327361

GI number: 116327361

Start: 616197

End: 616790

Strand: Direct

Name: uidR [C]

Synonym: LBL_0557

Alternate gene names: 116327361

Gene position: 616197-616790 (Clockwise)

Preceding gene: 116327360

Following gene: 116327365

Centisome position: 17.05

GC content: 39.73

Gene sequence:

>594_bases
GTGTTCAGGAAAGACGGAAGTCCTCTATATCCCTTGAATAGAGACTACAAGAACTCGCGTGAAAGGATTTTAGAGGGAGC
AGCGATCGCGTTTTCTAGATCAGGTTTTCATGGAACTTCCCTGAGAGAAATCAGTAAAGAATGTGGATTAGAACAACCCA
GTATTTATCATCATTTTCATTCCAAAGAAAATCTATTTAGAAAGACCTTGATTGCTACACATTTACTCGTTCTCAATGAG
ATTAGAAGAAGAGTCATTCGGGACCAAGGTCTTCACGTGGAAGTGGTTTCTATTTTTAAAGCAGTCGCTGAGACCGCAAA
GATTTATCCCGATAAGACAAGATTACCTTTCAGCTTAATCTATTCGGCTCCCGTCAATTTGCAGAACGAATACACGGAAA
GATACGGTAACCAATATAGAAAGCTACTCGAAGCCGCTTTTGAAAGAAACGACAGAATTGGGAGAAAGGAAGAAAAACTC
TCCCTTTGTGTGGATCTTTTGTACAGTTTAATTCTCGCTTGTTCTGTGGAGGTCTTATATTTGGATCGAGTCTCCGGTTT
GGAAGATAGAGTTCGATTGATTTTAGAGTTTTAG

Upstream 100 bases:

>100_bases
AGAATTTTGATACTTGGGTGATGGGATATTAAAATATTTGAAAGAAGTTTTAGGATCGTTCCATAGATAGGGGTCCATAA
AACCGGGGTTGCCTAGAAAA

Downstream 100 bases:

>100_bases
AGTTTAGTAAAGGTACGTCCCAAAACCTGAAGAGAAATCAGTTTTAATCGCTGGGTAGATTTGTAATCGGATGTGGCCAT
TCCGCAAATTACGTTTTCTT

Product: AcrR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGLEQPSIYHHFHSKENLFRKTLIATHLLVLNE
IRRRVIRDQGLHVEVVSIFKAVAETAKIYPDKTRLPFSLIYSAPVNLQNEYTERYGNQYRKLLEAAFERNDRIGRKEEKL
SLCVDLLYSLILACSVEVLYLDRVSGLEDRVRLILEF

Sequences:

>Translated_197_residues
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGLEQPSIYHHFHSKENLFRKTLIATHLLVLNE
IRRRVIRDQGLHVEVVSIFKAVAETAKIYPDKTRLPFSLIYSAPVNLQNEYTERYGNQYRKLLEAAFERNDRIGRKEEKL
SLCVDLLYSLILACSVEVLYLDRVSGLEDRVRLILEF
>Mature_197_residues
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGLEQPSIYHHFHSKENLFRKTLIATHLLVLNE
IRRRVIRDQGLHVEVVSIFKAVAETAKIYPDKTRLPFSLIYSAPVNLQNEYTERYGNQYRKLLEAAFERNDRIGRKEEKL
SLCVDLLYSLILACSVEVLYLDRVSGLEDRVRLILEF

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22949; Mature: 22949

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGLEQPSIYHHFH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
SKENLFRKTLIATHLLVLNEIRRRVIRDQGLHVEVVSIFKAVAETAKIYPDKTRLPFSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YSAPVNLQNEYTERYGNQYRKLLEAAFERNDRIGRKEEKLSLCVDLLYSLILACSVEVLY
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDRVSGLEDRVRLILEF
HHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MFRKDGSPLYPLNRDYKNSRERILEGAAIAFSRSGFHGTSLREISKECGLEQPSIYHHFH
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
SKENLFRKTLIATHLLVLNEIRRRVIRDQGLHVEVVSIFKAVAETAKIYPDKTRLPFSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YSAPVNLQNEYTERYGNQYRKLLEAAFERNDRIGRKEEKLSLCVDLLYSLILACSVEVLY
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDRVSGLEDRVRLILEF
HHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA