| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116327358
Identifier: 116327358
GI number: 116327358
Start: 614236
End: 614592
Strand: Direct
Name: 116327358
Synonym: LBL_0554
Alternate gene names: NA
Gene position: 614236-614592 (Clockwise)
Preceding gene: 116327357
Following gene: 116327360
Centisome position: 16.99
GC content: 39.78
Gene sequence:
>357_bases ATGCCGGACCTGAAAACCGTCAGCCTTTATACGATGGCGACCCTTTATATTATTGCGGGAATACTTCATTTTGTATTACC GAGATTTTATCTGAGAATCATGCCTCCTTATATTCCTTATCCTAAATTGGTCGTTTATTTTAGCGGTGTGATTGAGATCG GATTCGGAATCATGCTATTTTTTCCGGATACAAAACAACTCGGCGCTTGGGGAGTGATCCTTCTTCTGATCGCAGTATTT CCTGCAAATTTATACCACTATCAATCCAGGAGAAAAACCGATCCTCCCAAGTGGGTTTTACTTTTAAGACTTCCACTTCA GCTTTTATTGATTTACTGGGCCTATACTTTCGTTTAA
Upstream 100 bases:
>100_bases AAACAAAGGAATCTCTTTCGAAAAAGAGAAAAGAGAATATTTTGATTTATTAAACGAGATTCTATTTTGACTTGGATTTA TTTTTGAAAAGGAAAAGTTT
Downstream 100 bases:
>100_bases GATTCAATTTTTATAATATTATTCGAAAAAATCAATTCGAATACTTTTTCAACTCATCCATTCCGGGAAGATTGGTTAGG TCGGGAACGATTACGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MPDLKTVSLYTMATLYIIAGILHFVLPRFYLRIMPPYIPYPKLVVYFSGVIEIGFGIMLFFPDTKQLGAWGVILLLIAVF PANLYHYQSRRKTDPPKWVLLLRLPLQLLLIYWAYTFV
Sequences:
>Translated_118_residues MPDLKTVSLYTMATLYIIAGILHFVLPRFYLRIMPPYIPYPKLVVYFSGVIEIGFGIMLFFPDTKQLGAWGVILLLIAVF PANLYHYQSRRKTDPPKWVLLLRLPLQLLLIYWAYTFV >Mature_117_residues PDLKTVSLYTMATLYIIAGILHFVLPRFYLRIMPPYIPYPKLVVYFSGVIEIGFGIMLFFPDTKQLGAWGVILLLIAVFP ANLYHYQSRRKTDPPKWVLLLRLPLQLLLIYWAYTFV
Specific function: Unknown
COG id: COG4270
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13798; Mature: 13667
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLKTVSLYTMATLYIIAGILHFVLPRFYLRIMPPYIPYPKLVVYFSGVIEIGFGIMLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEE FPDTKQLGAWGVILLLIAVFPANLYHYQSRRKTDPPKWVLLLRLPLQLLLIYWAYTFV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDLKTVSLYTMATLYIIAGILHFVLPRFYLRIMPPYIPYPKLVVYFSGVIEIGFGIMLF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEE FPDTKQLGAWGVILLLIAVFPANLYHYQSRRKTDPPKWVLLLRLPLQLLLIYWAYTFV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA