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The map label for this gene is rpmC

Identifier: 116327272

GI number: 116327272

Start: 518441

End: 518725

Strand: Direct

Name: rpmC

Synonym: LBL_0461

Alternate gene names: 116327272

Gene position: 518441-518725 (Clockwise)

Preceding gene: 116327271

Following gene: 116327273

Centisome position: 14.34

GC content: 40.0

Gene sequence:

>285_bases
ATGAAAAAGATCAAATTACAAGAACTGAAAGACAGCGAAATTCTTGAGCAACTCGAAGAAGCGAGAAAGGTTCTTAGAAC
TTCTCGTTTCCAATATGGAGTGGCTCGTTCTTTGGAAAATCCAAAAGTAATTCACAACACGAAGAAGAAAATCGCCAAAC
TTCTGACCATTCAGAGAGAAAGACAATTGAAGGTCAATCCTGGAGAAAGAAAGTCGAGAGTTCTTTCGCGGGCTAAAAGA
AAGAAAAAAAATCTCGCAAGACTCAGCGCGAAGGTTAAGGGCTAG

Upstream 100 bases:

>100_bases
TTGAGATGAGCGGTATCGACGAAGAAACCGCAGAGAAAGCCCTTAGTTTGGCTTCTTACAAATTACCGATTCATACCGAA
TTCGTAAAAAGGTCTGCTCT

Downstream 100 bases:

>100_bases
AAAGAATTTATGACAGTCGGGAAACAACATATCAACAAATCGCTTCTTTATGAAGGAAGAGTGGTGAGTAATTCGATGAA
TAAAACAGTCGTGATCGTTG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKKIKLQELKDSEILEQLEEARKVLRTSRFQYGVARSLENPKVIHNTKKKIAKLLTIQRERQLKVNPGERKSRVLSRAKR
KKKNLARLSAKVKG

Sequences:

>Translated_94_residues
MKKIKLQELKDSEILEQLEEARKVLRTSRFQYGVARSLENPKVIHNTKKKIAKLLTIQRERQLKVNPGERKSRVLSRAKR
KKKNLARLSAKVKG
>Mature_94_residues
MKKIKLQELKDSEILEQLEEARKVLRTSRFQYGVARSLENPKVIHNTKKKIAKLLTIQRERQLKVNPGERKSRVLSRAKR
KKKNLARLSAKVKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_LEPBJ (Q04PU6)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_801832.1
- ProteinModelPortal:   Q04PU6
- SMR:   Q04PU6
- STRING:   Q04PU6
- GeneID:   4411190
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_2651
- HOGENOM:   HBG730819
- OMA:   MKAEELR
- ProtClustDB:   PRK00306
- BioCyc:   LBOR355277:LBJ_2651-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 11003; Mature: 11003

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKLQELKDSEILEQLEEARKVLRTSRFQYGVARSLENPKVIHNTKKKIAKLLTIQRE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RQLKVNPGERKSRVLSRAKRKKKNLARLSAKVKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIKLQELKDSEILEQLEEARKVLRTSRFQYGVARSLENPKVIHNTKKKIAKLLTIQRE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RQLKVNPGERKSRVLSRAKRKKKNLARLSAKVKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA