Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116249209

Identifier: 116249209

GI number: 116249209

Start: 593215

End: 593685

Strand: Reverse

Name: 116249209

Synonym: pRL120545

Alternate gene names: NA

Gene position: 593685-593215 (Counterclockwise)

Preceding gene: 116249210

Following gene: 116249207

Centisome position: 68.24

GC content: 61.36

Gene sequence:

>471_bases
ATGTCGATGACATCCAAGTTCATGAGCCGTCGCGCGGTGCTGGGCGGAACCTTGGCGGCCGCCGCTCTCCCTCTCGTGGC
GCAAGGGCAGGACGAGCGCGGCCCGGCAAGTCCCGAGGCTACAGGCGTCAGGATCAGGATAGGCTTCAACAATCTAACCC
TGACCGCGACACTCTCCAACAATCCGACGGCGCGCGATCTCGTTTCCATCCTGCCCCTGAACCTTAAGATCGAGGACTAC
GGCAGGAACGAAAAGATCGTCCATCTGCCGCGCAAGCTGACCGAAGAAGGCAGCGGTGCTTTCGGAAACGAGCAGCCGGG
CGACCTTTGCTACTTCAAACCGTGGGGTAATCTGGCCCTGTTCCATGCGGATTATCGCTGGGACGGGCTGATCCGGCTCG
GCCGCTTCGACGATGGCTTCGAGCCGTTGCTGGTGCGCGGCGAGTATCCGGTCCGCATAGAACGCATATGA

Upstream 100 bases:

>100_bases
GCCCGAACGGTCGCCTTCGCGGTGAACGAACCAGACGATGTCGACATCAACGAAATCCTGTTCCGGCCGACGGCTCAACC
TGTCTGACGGAAGGCGCGCC

Downstream 100 bases:

>100_bases
CAAGGGCCTTATGGCCGGAGATAGCAATTCGCCTTCCGCCCAAGCATGAAAGAACCCCATAGACGATACTTCCAGAACCA
GAAAGCCGCGGCCGGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSMTSKFMSRRAVLGGTLAAAALPLVAQGQDERGPASPEATGVRIRIGFNNLTLTATLSNNPTARDLVSILPLNLKIEDY
GRNEKIVHLPRKLTEEGSGAFGNEQPGDLCYFKPWGNLALFHADYRWDGLIRLGRFDDGFEPLLVRGEYPVRIERI

Sequences:

>Translated_156_residues
MSMTSKFMSRRAVLGGTLAAAALPLVAQGQDERGPASPEATGVRIRIGFNNLTLTATLSNNPTARDLVSILPLNLKIEDY
GRNEKIVHLPRKLTEEGSGAFGNEQPGDLCYFKPWGNLALFHADYRWDGLIRLGRFDDGFEPLLVRGEYPVRIERI
>Mature_155_residues
SMTSKFMSRRAVLGGTLAAAALPLVAQGQDERGPASPEATGVRIRIGFNNLTLTATLSNNPTARDLVSILPLNLKIEDYG
RNEKIVHLPRKLTEEGSGAFGNEQPGDLCYFKPWGNLALFHADYRWDGLIRLGRFDDGFEPLLVRGEYPVRIERI

Specific function: Unknown

COG id: COG4925

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17270; Mature: 17139

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTSKFMSRRAVLGGTLAAAALPLVAQGQDERGPASPEATGVRIRIGFNNLTLTATLSN
CCHHHHHHHHHHHHCCHHHHHHCCCEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECC
NPTARDLVSILPLNLKIEDYGRNEKIVHLPRKLTEEGSGAFGNEQPGDLCYFKPWGNLAL
CCCHHHHHHHCCCEEEEECCCCCCEEEECCHHHCCCCCCCCCCCCCCCEEEECCCCCEEE
FHADYRWDGLIRLGRFDDGFEPLLVRGEYPVRIERI
EEECCCCCCEEEECCCCCCCCEEEEECCCCEEEEEC
>Mature Secondary Structure 
SMTSKFMSRRAVLGGTLAAAALPLVAQGQDERGPASPEATGVRIRIGFNNLTLTATLSN
CHHHHHHHHHHHHCCHHHHHHCCCEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECC
NPTARDLVSILPLNLKIEDYGRNEKIVHLPRKLTEEGSGAFGNEQPGDLCYFKPWGNLAL
CCCHHHHHHHCCCEEEEECCCCCCEEEECCHHHCCCCCCCCCCCCCCCEEEECCCCCEEE
FHADYRWDGLIRLGRFDDGFEPLLVRGEYPVRIERI
EEECCCCCCEEEECCCCCCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA