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The map label for this gene is ohrR [H]

Identifier: 116248960

GI number: 116248960

Start: 309505

End: 309972

Strand: Direct

Name: ohrR [H]

Synonym: pRL120291

Alternate gene names: 116248960

Gene position: 309505-309972 (Clockwise)

Preceding gene: 116248957

Following gene: 116248963

Centisome position: 35.57

GC content: 60.68

Gene sequence:

>468_bases
ATGACCGCACGCCATAACGACCCGCCCCCTCTGCACGACCAATTGTGCTACGCAATTTACACTGCTGGTATTGCCATCCA
GCGTGCTTACAAGCCCCTTCTCGATGAGTTGGGCCTGACGTACCCGCAGTACCTCGTGCTCAACGTGCTGTGGGGCGAGG
ATGGGCAGACGGTGGGCGCCATTGCCAATGCCCTTGCCCTGGAATCCAGCACGCTGACGCCGCTTCTAAAGCGCCTTGAG
GTATCCGGCCTGCTGCGTAGGACCAGAAACCTGAGCAACGAGCGCCAGGTGTTGATTGCGTTGACCGACGAAGGCAGGGC
ATTACAGCACAAGGCTGGTTGTCTCAGCGACACCTTGCTTGCAGCTTCGACCCAGACGCCACAGGAATTGGGCGCTCTGA
ACCGCGACGTCCGCCATCTCCGCAACGCGATCTATTCCCAGATCGGCGGCTGGGACGCACCCGCCTGA

Upstream 100 bases:

>100_bases
ATGTAAGCTCGCAGACTTTGGATTGCGCGTCAAGATAATTCTTATCGCGATATTTAATTTCTCTCTAGCATGGGCTATAT
GGAGTCTACAGGAGCTCACA

Downstream 100 bases:

>100_bases
TTTGCCGTGTATGTCGGCGCCTAAGCTGTTGGCACTGTCCCCCCATCGATTGTATATTCGGTACCGGTGATCGACGCAGC
CCGGTCCGAGGCGAGGAAGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTARHNDPPPLHDQLCYAIYTAGIAIQRAYKPLLDELGLTYPQYLVLNVLWGEDGQTVGAIANALALESSTLTPLLKRLE
VSGLLRRTRNLSNERQVLIALTDEGRALQHKAGCLSDTLLAASTQTPQELGALNRDVRHLRNAIYSQIGGWDAPA

Sequences:

>Translated_155_residues
MTARHNDPPPLHDQLCYAIYTAGIAIQRAYKPLLDELGLTYPQYLVLNVLWGEDGQTVGAIANALALESSTLTPLLKRLE
VSGLLRRTRNLSNERQVLIALTDEGRALQHKAGCLSDTLLAASTQTPQELGALNRDVRHLRNAIYSQIGGWDAPA
>Mature_154_residues
TARHNDPPPLHDQLCYAIYTAGIAIQRAYKPLLDELGLTYPQYLVLNVLWGEDGQTVGAIANALALESSTLTPLLKRLEV
SGLLRRTRNLSNERQVLIALTDEGRALQHKAGCLSDTLLAASTQTPQELGALNRDVRHLRNAIYSQIGGWDAPA

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16983; Mature: 16851

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARHNDPPPLHDQLCYAIYTAGIAIQRAYKPLLDELGLTYPQYLVLNVLWGEDGQTVGA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH
IANALALESSTLTPLLKRLEVSGLLRRTRNLSNERQVLIALTDEGRALQHKAGCLSDTLL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCHHHHHHH
AASTQTPQELGALNRDVRHLRNAIYSQIGGWDAPA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TARHNDPPPLHDQLCYAIYTAGIAIQRAYKPLLDELGLTYPQYLVLNVLWGEDGQTVGA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH
IANALALESSTLTPLLKRLEVSGLLRRTRNLSNERQVLIALTDEGRALQHKAGCLSDTLL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCHHHHHHH
AASTQTPQELGALNRDVRHLRNAIYSQIGGWDAPA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]