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The map label for this gene is 116248936

Identifier: 116248936

GI number: 116248936

Start: 279017

End: 280285

Strand: Direct

Name: 116248936

Synonym: pRL120266

Alternate gene names: NA

Gene position: 279017-280285 (Clockwise)

Preceding gene: 116248935

Following gene: 116248937

Centisome position: 32.07

GC content: 64.46

Gene sequence:

>1269_bases
ATGAACACGCATATCGACCAGGCGAAGCGCATCCTCGCCGTGAACGATCGCGGCGGCTATACCGTGCCGACCGACCGGCT
CTACCCCTTCCAATGGAACTGGGATTCCGCCTTCGTCGCCATGGGCTTTGCGCTCTACGATATCGATCGCGCCTATCGCG
AGCTGGAGCGGCTGGTCGAGGGCCAATGGGTGGACGGGATGATCCCGCATATCGTCTTCCACGCGCCGAGCGAAACCTAT
TTCCCGGGACCGAACGTCTGGCGCACTGAGCAGACGATCCCGACCTCCGGCATAACCCAGCCGCCGGTCTTCGCGATCGC
GCTGCGCAAGCTGCACGAAGCTGCCGGCAAAGGCGCCGAGGAGCGCATCCTGCCGCTCTACGAGGCGGCGCTGAAATGGC
ATCGCTGGTGGTATTCCGCCCGTGATCCCGATGGCACCGGGCTCGTTGCGCTCCTGCATCCGTGGGAAAGCGGCAGCGAC
AATTCTCCCGCCTGGGACATCGCGCTCGCCCGCGTGCCAACCGACACCGACACGCCCGTCGTGCGCAAGGATACCGGCCA
TGTCGATGCCGACATGCGTCCGCGCGACGAGGATTACCGCCGCTTCATCCATCTCGTCGATACCTATGCCGCCTGCGGCT
GGGAGCCGGCTAGGCAATGGGAAAAGGCATCCTTCAAGGTCGCCGAGGTCCAGACGAGCGCGATCCTGCTCAAGGCGGGC
GAAGATCTGGAACACCTCGCCCTCCTGTTCGGGCGGACCGAGGACGCGATCGAGATCGCCGCCTTCAACAACCGCACCCG
CAAGGCGATAATGGCCCAGTGGCGGCCCGAGCTTGCCCGCTTCGTCTCGCGCGACCTGATCTCCGGCGAAGATGTCGAAG
CTGCCACGCAAGCGGGCTTCATCCCCCTCCTCTCGCTGGACCTCGACAAGCAGGTTGCCGACGCCCTGGTCTTCGAAATG
AAGGCCTGGTCCAAGGATCTCAAGGTCGCCTTCCCCACAACCAAACCCGGCATCGCCAGCTGGGAGCCGAAGCGCTACTG
GCGCGGCCCCGCCTGGGCGATCATCAACTGGCTGCTGATCGACGGATTGAATCGCAATGGCCACGCTGATGTCGCCGAAG
AACTGAGGCGATCCACCATCGCAGCGATCGAAACGGAAGGTTTCGCCGAATATTTCGACCCGGTCACCGGCGAAGGCTGC
GGCGGCCTCGGCTTTTCCTGGACGGCTGCCGCCTATCTGTGGCTTGAGCGAGGCGCGCTCCCTGCCTGA

Upstream 100 bases:

>100_bases
ATCGGCCTGAAGCTCGACCAGAAGCGCATAACTTGGCTTTCGCCCGAAAGCGGCAAGTCCTTTCCGGCCGTTTTGGCCTA
AGAATACCGGAGCATCCAGA

Downstream 100 bases:

>100_bases
GTGTAGAGCCACGCCCAATTAAGCCGTTTTCTGCGATTGGCTTAACCGCTCCAGGTCGCCTATATGTAAAGCGTGTGATT
TAATCATACGCTGTGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MNTHIDQAKRILAVNDRGGYTVPTDRLYPFQWNWDSAFVAMGFALYDIDRAYRELERLVEGQWVDGMIPHIVFHAPSETY
FPGPNVWRTEQTIPTSGITQPPVFAIALRKLHEAAGKGAEERILPLYEAALKWHRWWYSARDPDGTGLVALLHPWESGSD
NSPAWDIALARVPTDTDTPVVRKDTGHVDADMRPRDEDYRRFIHLVDTYAACGWEPARQWEKASFKVAEVQTSAILLKAG
EDLEHLALLFGRTEDAIEIAAFNNRTRKAIMAQWRPELARFVSRDLISGEDVEAATQAGFIPLLSLDLDKQVADALVFEM
KAWSKDLKVAFPTTKPGIASWEPKRYWRGPAWAIINWLLIDGLNRNGHADVAEELRRSTIAAIETEGFAEYFDPVTGEGC
GGLGFSWTAAAYLWLERGALPA

Sequences:

>Translated_422_residues
MNTHIDQAKRILAVNDRGGYTVPTDRLYPFQWNWDSAFVAMGFALYDIDRAYRELERLVEGQWVDGMIPHIVFHAPSETY
FPGPNVWRTEQTIPTSGITQPPVFAIALRKLHEAAGKGAEERILPLYEAALKWHRWWYSARDPDGTGLVALLHPWESGSD
NSPAWDIALARVPTDTDTPVVRKDTGHVDADMRPRDEDYRRFIHLVDTYAACGWEPARQWEKASFKVAEVQTSAILLKAG
EDLEHLALLFGRTEDAIEIAAFNNRTRKAIMAQWRPELARFVSRDLISGEDVEAATQAGFIPLLSLDLDKQVADALVFEM
KAWSKDLKVAFPTTKPGIASWEPKRYWRGPAWAIINWLLIDGLNRNGHADVAEELRRSTIAAIETEGFAEYFDPVTGEGC
GGLGFSWTAAAYLWLERGALPA
>Mature_422_residues
MNTHIDQAKRILAVNDRGGYTVPTDRLYPFQWNWDSAFVAMGFALYDIDRAYRELERLVEGQWVDGMIPHIVFHAPSETY
FPGPNVWRTEQTIPTSGITQPPVFAIALRKLHEAAGKGAEERILPLYEAALKWHRWWYSARDPDGTGLVALLHPWESGSD
NSPAWDIALARVPTDTDTPVVRKDTGHVDADMRPRDEDYRRFIHLVDTYAACGWEPARQWEKASFKVAEVQTSAILLKAG
EDLEHLALLFGRTEDAIEIAAFNNRTRKAIMAQWRPELARFVSRDLISGEDVEAATQAGFIPLLSLDLDKQVADALVFEM
KAWSKDLKVAFPTTKPGIASWEPKRYWRGPAWAIINWLLIDGLNRNGHADVAEELRRSTIAAIETEGFAEYFDPVTGEGC
GGLGFSWTAAAYLWLERGALPA

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47548; Mature: 47548

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHIDQAKRILAVNDRGGYTVPTDRLYPFQWNWDSAFVAMGFALYDIDRAYRELERLVE
CCCCHHCCCEEEEEECCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
GQWVDGMIPHIVFHAPSETYFPGPNVWRTEQTIPTSGITQPPVFAIALRKLHEAAGKGAE
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
ERILPLYEAALKWHRWWYSARDPDGTGLVALLHPWESGSDNSPAWDIALARVPTDTDTPV
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCE
VRKDTGHVDADMRPRDEDYRRFIHLVDTYAACGWEPARQWEKASFKVAEVQTSAILLKAG
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEEEEEEEEECC
EDLEHLALLFGRTEDAIEIAAFNNRTRKAIMAQWRPELARFVSRDLISGEDVEAATQAGF
CCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
IPLLSLDLDKQVADALVFEMKAWSKDLKVAFPTTKPGIASWEPKRYWRGPAWAIINWLLI
EEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHH
DGLNRNGHADVAEELRRSTIAAIETEGFAEYFDPVTGEGCGGLGFSWTAAAYLWLERGAL
CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PA
CC
>Mature Secondary Structure
MNTHIDQAKRILAVNDRGGYTVPTDRLYPFQWNWDSAFVAMGFALYDIDRAYRELERLVE
CCCCHHCCCEEEEEECCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
GQWVDGMIPHIVFHAPSETYFPGPNVWRTEQTIPTSGITQPPVFAIALRKLHEAAGKGAE
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
ERILPLYEAALKWHRWWYSARDPDGTGLVALLHPWESGSDNSPAWDIALARVPTDTDTPV
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCE
VRKDTGHVDADMRPRDEDYRRFIHLVDTYAACGWEPARQWEKASFKVAEVQTSAILLKAG
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEEEEEEEEECC
EDLEHLALLFGRTEDAIEIAAFNNRTRKAIMAQWRPELARFVSRDLISGEDVEAATQAGF
CCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
IPLLSLDLDKQVADALVFEMKAWSKDLKVAFPTTKPGIASWEPKRYWRGPAWAIINWLLI
EEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHH
DGLNRNGHADVAEELRRSTIAAIETEGFAEYFDPVTGEGCGGLGFSWTAAAYLWLERGAL
CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA