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The map label for this gene is eryD [H]

Identifier: 116248877

GI number: 116248877

Start: 217405

End: 218340

Strand: Direct

Name: eryD [H]

Synonym: pRL120207

Alternate gene names: 116248877

Gene position: 217405-218340 (Clockwise)

Preceding gene: 116248876

Following gene: 116248878

Centisome position: 24.99

GC content: 61.97

Gene sequence:

>936_bases
ATGACGGACGCCGATGATACGCTTGCCGTGCGCGCTGCCTGGCTTCACTATGCCGGTGGCCTGACGCAGTCCGACGTTGC
TCGCCGCCTCGGCGTGCCGTCGGTAAAGGCCCATCGCCTGATCGCGAGAGCGGTCGCCGATGGCGTCGTCAAAGTTACCA
TCGACGGGGATATCGTCGAATGCGTCGAGCTGGAGATGCGGCTTTCGGAACGGTTCGGGCTTCAATATTGCGAGGTCGCA
CCCGATCTCGGCGAGGAAGGCTTGCCGCTGCGCGCACTCGGCCATGCCGGCGCCGGCTATCTCAAGCGCGAGATCGAGCG
CGGCGACAATAGGGTCATCGGCCTTGGTCATGGCCGCACGCTTTCTGCCGCCGTCCAATATATGCCAAGGGTGAGCGCGA
AGAACCTGCGCTTCGTCTCGTTGCTTGGCGGCCTGACACGAAACTACGGCGCCAATCCCTATGACGTGATGCATCGCATC
GCCGAAAAGACCGGCGCCCATGCCTATGTCATGCCGGTTCCCTTTTTCGCCAATACCGGCGAGGACCGCGAAGTGCTGAA
GGCGCAGCGTGCCGTCAAGGAGGTCTTCGACCTTGCCAACAATGCCGATCTGAAGCTCGTCGGCCTGGGAACTGTCGATG
CCGAGGCGCAGCTTGTTTTATCCGGTATGGTCGAACCCGGTGAAATCGACGACATTGCCAATGCCGGCGGCGTCGGCGAA
ATCCTCGGACATTTTTTCGACGCCGACGGCCATATCCTCGACACCGCGCTGACGGCGCGCACGCTTTCTGCGTCTTTTCC
CAAGACCAAGAAAGAGCGGCTTGTGGCGCTGGCGGGCGGACAGTCGAAAGTGGCTGCCATCCGGGCAATTCTGAATAGCC
GCCGCCTTTTCGGGCTGATCACCGACGAACGAACCGCGCAGGCGCTGCTGAAGTAG

Upstream 100 bases:

>100_bases
GACACCGGTGTCGCTGACTTGAACATCTGAGGCGGAGATCTTTAAAAGGCAGCACTGCGATACGGCGGAATCGCCGCATG
ACCTTCGAAAAGGAGCCGTG

Downstream 100 bases:

>100_bases
CTATGGAAACACAACAATATTTGATCGCAAAATAACATAATAAATGTTGATTATCACGCATATTCCGTTATCTTAACATT
AAACGAGGGTGGAGACCGGG

Product: putative erythritol operon transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTDADDTLAVRAAWLHYAGGLTQSDVARRLGVPSVKAHRLIARAVADGVVKVTIDGDIVECVELEMRLSERFGLQYCEVA
PDLGEEGLPLRALGHAGAGYLKREIERGDNRVIGLGHGRTLSAAVQYMPRVSAKNLRFVSLLGGLTRNYGANPYDVMHRI
AEKTGAHAYVMPVPFFANTGEDREVLKAQRAVKEVFDLANNADLKLVGLGTVDAEAQLVLSGMVEPGEIDDIANAGGVGE
ILGHFFDADGHILDTALTARTLSASFPKTKKERLVALAGGQSKVAAIRAILNSRRLFGLITDERTAQALLK

Sequences:

>Translated_311_residues
MTDADDTLAVRAAWLHYAGGLTQSDVARRLGVPSVKAHRLIARAVADGVVKVTIDGDIVECVELEMRLSERFGLQYCEVA
PDLGEEGLPLRALGHAGAGYLKREIERGDNRVIGLGHGRTLSAAVQYMPRVSAKNLRFVSLLGGLTRNYGANPYDVMHRI
AEKTGAHAYVMPVPFFANTGEDREVLKAQRAVKEVFDLANNADLKLVGLGTVDAEAQLVLSGMVEPGEIDDIANAGGVGE
ILGHFFDADGHILDTALTARTLSASFPKTKKERLVALAGGQSKVAAIRAILNSRRLFGLITDERTAQALLK
>Mature_310_residues
TDADDTLAVRAAWLHYAGGLTQSDVARRLGVPSVKAHRLIARAVADGVVKVTIDGDIVECVELEMRLSERFGLQYCEVAP
DLGEEGLPLRALGHAGAGYLKREIERGDNRVIGLGHGRTLSAAVQYMPRVSAKNLRFVSLLGGLTRNYGANPYDVMHRIA
EKTGAHAYVMPVPFFANTGEDREVLKAQRAVKEVFDLANNADLKLVGLGTVDAEAQLVLSGMVEPGEIDDIANAGGVGEI
LGHFFDADGHILDTALTARTLSASFPKTKKERLVALAGGQSKVAAIRAILNSRRLFGLITDERTAQALLK

Specific function: Regulates transcription of many different genes. In the absence of autoinducer 2 (AI-2), represses transcription of the lsrACDBFG operon and its own transcription. In the presence of AI- 2, lsrR is inactivated by binding phospho-AI-2, leading to the trans

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=309, Percent_Identity=32.3624595469256, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI87082414, Length=314, Percent_Identity=27.0700636942675, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 33378; Mature: 33247

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDADDTLAVRAAWLHYAGGLTQSDVARRLGVPSVKAHRLIARAVADGVVKVTIDGDIVE
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCHHH
CVELEMRLSERFGLQYCEVAPDLGEEGLPLRALGHAGAGYLKREIERGDNRVIGLGHGRT
HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEECCCCH
LSAAVQYMPRVSAKNLRFVSLLGGLTRNYGANPYDVMHRIAEKTGAHAYVMPVPFFANTG
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCEECCCC
EDREVLKAQRAVKEVFDLANNADLKLVGLGTVDAEAQLVLSGMVEPGEIDDIANAGGVGE
CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHCCCCHHH
ILGHFFDADGHILDTALTARTLSASFPKTKKERLVALAGGQSKVAAIRAILNSRRLFGLI
HHHHHHCCCCCEEHHHHHHHHHHCCCCCCCHHEEEEEECCCHHHHHHHHHHHCCCEEEEE
TDERTAQALLK
CCCHHHHHHCC
>Mature Secondary Structure 
TDADDTLAVRAAWLHYAGGLTQSDVARRLGVPSVKAHRLIARAVADGVVKVTIDGDIVE
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCHHH
CVELEMRLSERFGLQYCEVAPDLGEEGLPLRALGHAGAGYLKREIERGDNRVIGLGHGRT
HHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEECCCCH
LSAAVQYMPRVSAKNLRFVSLLGGLTRNYGANPYDVMHRIAEKTGAHAYVMPVPFFANTG
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCEECCCC
EDREVLKAQRAVKEVFDLANNADLKLVGLGTVDAEAQLVLSGMVEPGEIDDIANAGGVGE
CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHCCCCHHH
ILGHFFDADGHILDTALTARTLSASFPKTKKERLVALAGGQSKVAAIRAILNSRRLFGLI
HHHHHHCCCCCEEHHHHHHHHHHCCCCCCCHHEEEEEECCCHHHHHHHHHHHCCCEEEEE
TDERTAQALLK
CCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]